MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-8-P3a

Family name MIR-8 (all species)
Seed AAUACUG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-429
Paralogues Cfa-Mir-8-P1a  Cfa-Mir-8-P1b  Cfa-Mir-8-P2a  Cfa-Mir-8-P2b 
Orthologues Aae-Mir-8  Aca-Mir-8-P3a  Ami-Mir-8-P3a  Asu-Mir-8  Bfl-Mir-8-P3  Bge-Mir-8  Bla-Mir-8-P3  Bpl-Mir-8  Bta-Mir-8-P3a  Cbr-Mir-8  Cel-Mir-8  Cgi-Mir-8  Cli-Mir-8-P3a  Cmi-Mir-8-P3a  Cpi-Mir-8-P3a  Cpo-Mir-8-P3a  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dno-Mir-8-P3a  Dpu-Mir-8  Dre-Mir-8-P3a  Dsi-Mir-8  Dya-Mir-8  Esc-Mir-8  Ete-Mir-8-P3a  Gga-Mir-8-P3a  Gja-Mir-8-P3a  Gmo-Mir-8-P3a  Hme-Mir-8  Hsa-Mir-8-P3a  Isc-Mir-8  Lan-Mir-8  Lch-Mir-8-P3a  Lgi-Mir-8  Loc-Mir-8-P3a  Mal-Mir-8-P3a  Mdo-Mir-8-P3a  Mml-Mir-8-P3a  Mmu-Mir-8-P3a  Mun-Mir-8-P3a  Npo-Mir-8  Oan-Mir-8-P3a  Obi-Mir-8  Ocu-Mir-8-P3a  Ovu-Mir-8  Pbv-Mir-8-P3a  Pfl-Mir-8  Pmi-Mir-8  Rno-Mir-8-P3a  Sha-Mir-8-P3a  Sko-Mir-8  Spt-Mir-8-P3a  Spu-Mir-8  Sto-Mir-8-P3a  Tca-Mir-8  Tni-Mir-8-P3a  Xla-Mir-8-P3a1  Xla-Mir-8-P3a2  Xtr-Mir-8-P3a 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(canFam3_add)		 chr5: 56370524-56370582 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-8-P3a)		 Mir-8-P1a chr5: 56368408-56368466 [+] UCSC Ensembl
Mir-8-P2a chr5: 56369078-56369138 [+] UCSC Ensembl
Mir-8-P3a chr5: 56370524-56370582 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCGCCCGCACCACAGCCUGCUGAUGGGCGUCUUACCAGACACGGUUAGAUCUGGGUUCUGGUGUCUAAUACUGUCUGGUAAUGCCGUUCAUCCAUGGCCUGACCACCGCCGAGGAGG
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Structure
        10        20           30         40        50        
GGCCGCCCGCACCACAGCCU   ---       -| C          CG      UCUGGG 
                    GCU   GAUGGGC GU UUACCAGACA  GUUAGA      U
                    CGG   CUACUUG CG AAUGGUCUGU  UAAUCU      U
GGAGGAGCCGCCACCAGUC-   UAC       C^ U          CA      GUGGUC 
       110        100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-8-P3a_5p*
mirBase accessionNone
Sequence 
0- GUCUUACCAGACACGGUUAGA -21
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Mature sequence

Cfa-Mir-8-P3a_3p
mirBase accessionMIMAT0001539
Sequence 
37- UAAUACUGUCUGGUAAUGCCGU -59
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Proposed targets TargetScanVert: cfa-miR-429
miRDB: MIMAT0001539