MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-204-P4

Family name MIR-204 (all species)
Seed UCCCUUU
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-204-P1  Gja-Mir-204-P2 
Orthologues Ami-Mir-204-P4  Cli-Mir-204-P4  Cmi-Mir-204-P4  Cpi-Mir-204-P4  Ebu-Mir-204  Gga-Mir-204-P4  Lch-Mir-204-P4  Mun-Mir-204-P4  Pbv-Mir-204-P4  Pma-Mir-204  Spt-Mir-204-P4  Sto-Mir-204-P4  Tgu-Mir-204-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015170928.1: 396203-396260 [+]
Precursor
(pre-Mir +30nt flank)
AUGCCCCCCUCCCUCCCUGGUUUUGUGGCUUUCCCUUUGUCAUCCUAUGCCUGGGAAACUCUUGGAGGCUGGGACGCUGAAGGGAAGGCCACGGGACUGCGGGUCCAGCCGGGGCAAG
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Structure
        10          20        30         40        50         
AUGCCCCCCUCCCUCCCU--                    -| CA     U    GGGAAA 
                    GGUUUUGUGGCUUUCCCUUU GU  UCCUA GCCU      \
                    UCAGGGCACCGGAAGGGAAG CG  AGGGU CGGA      C
GAACGGGGCCGACCUGGGCG                    U^ C-     -    GGUUCU 
      110       100        90        80         70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Gja-Mir-204-P4_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Gja-Mir-204-P4_3p*
mirBase accessionNone
Sequence 
37- GCUGGGACGCUGAAGGGAAGG -58
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