MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-204-P4

Family name MIR-204 (all species)
Seed UCCCUUU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-204-P1  Cmi-Mir-204-P2 
Orthologues Ami-Mir-204-P4  Cli-Mir-204-P4  Cpi-Mir-204-P4  Ebu-Mir-204  Gga-Mir-204-P4  Gja-Mir-204-P4  Lch-Mir-204-P4  Mun-Mir-204-P4  Pbv-Mir-204-P4  Pma-Mir-204  Spt-Mir-204-P4  Sto-Mir-204-P4  Tgu-Mir-204-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636146.1: 13447-13505 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGUGAUGGUUCCUCAUGUGGCUUAUGAUCUUCCCUUUGUCAUCCUAUGCCUGAUGGUAAUGAUGGGGGCUGGGACGGUAAAGGGACGUUCAGGUGUCAAUCACUCCGUCGCUGUGGCU
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Structure
        10          20        30        40        50         
GUGUGAUGGUUCCUCAUG--|   UUA   UCU       GU A     U    GAUGGU 
                    UGGC   UGA   UCCCUUU  C UCCUA GCCU      A
                    ACUG   ACU   AGGGAAA  G AGGGU CGGG      A
UCGGUGUCGCUGCCUCACUA^   UGG   UGC       UG C     -    GGUAGU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-204-P4_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Cmi-Mir-204-P4_3p*
mirBase accessionNone
Sequence 
38- GCUGGGACGGUAAAGGGACGU -59
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