MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-204-P2

Family name MIR-204 (all species)
Seed UCCCUUU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-204-P1  Cmi-Mir-204-P4 
Orthologues Aca-Mir-204-P2  Ami-Mir-204-P2  Bta-Mir-204-P2  Cfa-Mir-204-P2  Cli-Mir-204-P2  Cpi-Mir-204-P2  Cpo-Mir-204-P2  Dno-Mir-204-P2  Dre-Mir-204-P2  Ebu-Mir-204  Ete-Mir-204-P2  Gga-Mir-204-P2  Gja-Mir-204-P2  Gmo-Mir-204-P2  Hsa-Mir-204-P2  Lch-Mir-204-P2  Loc-Mir-204-P2  Mal-Mir-204-P2  Mdo-Mir-204-P2  Mml-Mir-204-P2  Mmu-Mir-204-P2  Mun-Mir-204-P2  Oan-Mir-204-P2  Ocu-Mir-204-P2  Pbv-Mir-204-P2  Pma-Mir-204  Rno-Mir-204-P2  Sha-Mir-204-P2  Spt-Mir-204-P2  Sto-Mir-204-P2  Tgu-Mir-204-P2  Tni-Mir-204-P2  Xla-Mir-204-P2a  Xla-Mir-204-P2b  Xtr-Mir-204-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636021.1: 267272-267331 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCAACCAUCCAUGUGAGUGGCCCAUGGGCUUCCCUUUGUCAUCCUAUGCCUGAAAUUAUAUGAAGGGGGCUGGGAAGGCAAAGGGAUGUUCAAGUGUCAUCAGUGGCAUCGCUUGAUCG
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Structure
        10          20        30        40        50          
UGCAACCAUCCAUGUGA--|    CCA     U          A     U    GAAAUUA 
                   GUGGC   UGGGC UCCCUUUGUC UCCUA GCCU       \
                   UACUG   ACUUG AGGGAAACGG AGGGU CGGG       U
GCUAGUUCGCUACGGUGAC^    UGA     U          A     -    GGAAGUA 
.       110       100        90        80         70
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-204-P2_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Cmi-Mir-204-P2_3p* (predicted)
mirBase accessionNone
Sequence 
39- GCUGGGAAGGCAAAGGGAUGU -60
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