MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-204-P2

Family name MIR-204 (all species)
Seed UCCCUUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-204-P1  Sto-Mir-204-P4 
Orthologues Aca-Mir-204-P2  Ami-Mir-204-P2  Bta-Mir-204-P2  Cfa-Mir-204-P2  Cja-Mir-204-P2  Cli-Mir-204-P2  Cmi-Mir-204-P2  Cpi-Mir-204-P2  Cpo-Mir-204-P2  Dno-Mir-204-P2  Dre-Mir-204-P2  Ebu-Mir-204  Eca-Mir-204-P2  Ete-Mir-204-P2  Gga-Mir-204-P2  Gja-Mir-204-P2  Gmo-Mir-204-P2  Hsa-Mir-204-P2  Laf-Mir-204-P2  Lch-Mir-204-P2  Loc-Mir-204-P2  Mal-Mir-204-P2  Mdo-Mir-204-P2  Mml-Mir-204-P2  Mmr-Mir-204-P2  Mmu-Mir-204-P2  Mun-Mir-204-P2  Neu-Mir-204-P2  Oan-Mir-204-P2  Ocu-Mir-204-P2  Pab-Mir-204-P2  Pbv-Mir-204-P2  Pma-Mir-204  Rno-Mir-204-P2  Sha-Mir-204-P2  Spt-Mir-204-P2  Tgu-Mir-204-P2  Tni-Mir-204-P2  Xla-Mir-204-P2a  Xla-Mir-204-P2b  Xtr-Mir-204-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01000604.1: 438648-438706 [-]
Precursor
(pre-Mir +30nt flank)
UGUAGCCGUUAACCCAUGUGACUUGUGGGCUUCCCUUUGUCAUCCUAUGCCUGGGAAUAUAUGAAGGGGCUGGGAAUGCAAAGGGAUGUUCAACAGUUACCAGCGGCAUCCUAUUGACC
Get precursor sequence
Structure
        10          20        30        40        50         
UGUAGCCGUUAACCCAU--|     UG     U         CA     U    GGGAAU 
                   GUGACU  UGGGC UCCCUUUGU  UCCUA GCCU      A
                   CAUUGA  ACUUG AGGGAAACG  AGGGU CGGG      U
CCAGUUAUCCUACGGCGAC^     CA     U         UA     -    GAAGUA 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-204-P2_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
Get sequence
Star sequence

Sto-Mir-204-P2_3p*
mirBase accessionNone
Sequence 
38- GCUGGGAAUGCAAAGGGAUGU -59
Get sequence