MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-204-P2

Family name MIR-204 (all species)
Seed UCCCUUU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-204-1
Paralogues Dre-Mir-204-P1a  Dre-Mir-204-P1b 
Orthologues Aca-Mir-204-P2  Ami-Mir-204-P2  Bta-Mir-204-P2  Cfa-Mir-204-P2  Cja-Mir-204-P2  Cli-Mir-204-P2  Cmi-Mir-204-P2  Cpi-Mir-204-P2  Cpo-Mir-204-P2  Dno-Mir-204-P2  Ebu-Mir-204  Eca-Mir-204-P2  Ete-Mir-204-P2  Gga-Mir-204-P2  Gja-Mir-204-P2  Gmo-Mir-204-P2  Hsa-Mir-204-P2  Laf-Mir-204-P2  Lch-Mir-204-P2  Loc-Mir-204-P2  Mal-Mir-204-P2  Mdo-Mir-204-P2  Mml-Mir-204-P2  Mmr-Mir-204-P2  Mmu-Mir-204-P2  Mun-Mir-204-P2  Neu-Mir-204-P2  Oan-Mir-204-P2  Ocu-Mir-204-P2  Pab-Mir-204-P2  Pbv-Mir-204-P2  Pma-Mir-204  Rno-Mir-204-P2  Sha-Mir-204-P2  Spt-Mir-204-P2  Sto-Mir-204-P2  Tgu-Mir-204-P2  Tni-Mir-204-P2  Xla-Mir-204-P2a  Xla-Mir-204-P2b  Xtr-Mir-204-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr5: 25972085-25972142 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCCCUCCCUUGUCAUGUGACCUGUGGACUUCCCUUUGUCAUCCUAUGCCUGGAGUAAUAGAGGGGGCUGGGAAGUCAAAGGGACGCUCAGGCGUCAUCAUUCGCAUCAAAAUUGAC
Get precursor sequence
Structure
        10          20          30        40        50         
CCUCCCUCCCUUGUCAU--    --|   U  ACU        UCA     U    GGAGUA 
                   GUGA  CCUG GG   UCCCUUUG   UCCUA GCCU      \
                   UACU  GGAC UC   AGGGAAAC   AGGGU CGGG      A
CAGUUAAAACUACGCUUAC    GC^   -  GC-        UGA     -    GGAGAU 
      110       100        90          80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-204-P2_5p
mirBase accessionMIMAT0001279
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
Get sequence
Star sequence

Dre-Mir-204-P2_3p*
mirBase accessionMIMAT0031924
Sequence 
37- GCUGGGAAGUCAAAGGGACGC -58
Get sequence