MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-204-P1b

Family name MIR-204 (all species)
Seed UCCCUUU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-204-2
Paralogues Dre-Mir-204-P1a  Dre-Mir-204-P2 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cja-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Ebu-Mir-204  Eca-Mir-204-P1  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Laf-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmr-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Neu-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pab-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Xtr-Mir-204-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr7: 29337026-29337083 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUAGUGACCAGUUUGUGACCUCCUGGGUUUCCCUUUGUCAUCCUAUGCCUGCAGUUCCUGAUGAGGCUGGGACAGCAAAGGGAGGUUCAGAUGUCGACCUGUACUACAGUCAAUAC
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Structure
        10           20        30        40        50         
CUCUAGUGACCAGUUUG---|   CUC   GG           CA     U    GCAGUU 
                    UGAC   CUG  UUUCCCUUUGU  UCCUA GCCU      \
                    GCUG   GAC  GGAGGGAAACG  AGGGU CGGA      C
CAUAACUGACAUCAUGUCCA^   UA-   UU           AC     -    GUAGUC 
      110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-204-P1b_5p
mirBase accessionMIMAT0001279
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Dre-Mir-204-P1b_3p*
mirBase accessionMIMAT0031987
Sequence 
37- GCUGGGACAGCAAAGGGAGGU -58
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