MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-204-P1

Family name MIR-204 (all species)
Seed UCCCUUU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-204
Paralogues Mdo-Mir-204-P2 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cja-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Dre-Mir-204-P1a  Dre-Mir-204-P1b  Ebu-Mir-204  Eca-Mir-204-P1  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1a  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Laf-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mal-Mir-204-P1a  Mml-Mir-204-P1  Mmr-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Neu-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pab-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1a  Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xtr-Mir-204-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 1: 142496661-142496718 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAACUUCAACUGACUAUGUGACCUGUGGGCUUCCCUUUGUCAUCCUAUGCCUGGAAAUCAGAGUGGGGCAGGGACAGCAAAGGGAUGCUCAGCUGUCGUCUUCUACAGCAUUGAACUA
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Structure
        10          20        30        40        50         
AAACUUCAACUGACUAUG--|   CUG     U         CA    A     GGAAAU 
                    UGAC   UGGGC UCCCUUUGU  UCCU UGCCU      \
                    GCUG   ACUCG AGGGAAACG  AGGG ACGGG      C
AUCAAGUUACGACAUCUUCU^   UCG     U         AC    -     GUGAGA 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-204-P1_5p
mirBase accessionMIMAT0004127
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Proposed targets TargetScanVert: mdo-miR-204
Star sequence

Mdo-Mir-204-P1_3p*
mirBase accessionNone
Sequence 
37- GCAGGGACAGCAAAGGGAUGC -58
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