Mir-204-P1

MirGeneDB ID

Hsa-Mir-204-P1

Family name

MIR-204 (all species)

Seed

UCCCUUU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-211

Paralogues

Hsa-Mir-204-P2

Orthologues

Aca-Mir-204-P1 Ami-Mir-204-P1 Bta-Mir-204-P1 Cfa-Mir-204-P1 Cja-Mir-204-P1 Cli-Mir-204-P1 Cmi-Mir-204-P1 Cpi-Mir-204-P1 Cpo-Mir-204-P1 Dno-Mir-204-P1 Dre-Mir-204-P1a Dre-Mir-204-P1b Ebu-Mir-204 Eca-Mir-204-P1 Gga-Mir-204-P1 Gja-Mir-204-P1 Gmo-Mir-204-P1a Gmo-Mir-204-P1b Laf-Mir-204-P1 Lch-Mir-204-P1 Loc-Mir-204-P1 Mal-Mir-204-P1a Mdo-Mir-204-P1 Mml-Mir-204-P1 Mmr-Mir-204-P1 Mmu-Mir-204-P1 Mun-Mir-204-P1 Neu-Mir-204-P1 Oan-Mir-204-P1 Ocu-Mir-204-P1 Pab-Mir-204-P1 Pbv-Mir-204-P1 Pma-Mir-204 Rno-Mir-204-P1 Sha-Mir-204-P1 Spt-Mir-204-P1 Sto-Mir-204-P1 Tgu-Mir-204-P1 Tni-Mir-204-P1a Xla-Mir-204-P1c Xla-Mir-204-P1d Xtr-Mir-204-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr15: 31065059-31065116 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCAUUUCACCUGGCCAUGUGACUUGUGGGCUUCCCUUUGUCAUCCUUCGCCUAGGGCUCUGAGCAGGGCAGGGACAGCAAAGGGGUGCUCAGUUGUCACUUCCCACAGCACGGAGCUU

Get precursor sequence

Structure

        10          20        30        40        50         
CCAUUUCACCUGGCCAU--|    UUG     U         CA     C    AGGGCU 
                   GUGAC   UGGGC UCCCUUUGU  UCCUU GCCU      \
                   CACUG   ACUCG GGGGAAACG  AGGGA CGGG      C
UUCGAGGCACGACACCCUU^    UUG     U         AC     -    ACGAGU 
      110       100        90        80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-204-P1_5p

mirBase accession

MIMAT0000268

Sequence

0- UUCCCUUUGUCAUCCUUCGCCU -22

Get sequence

Proposed targets

microrna.org: MIMAT0000268
TargetScanVert: hsa-miR-211-5p
TargetMiner: hsa-miR-211-5p
miRDB: MIMAT0000268

Star sequence

Hsa-Mir-204-P1_3p*

mirBase accession

MIMAT0022694

Sequence

37- GCAGGGACAGCAAAGGGGUGC -58

Get sequence

Proposed targets

TargetScanVert: hsa-miR-211-3p
TargetMiner: hsa-miR-211-3p
miRDB: MIMAT0022694