MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-204-P1

Family name MIR-204 (all species)
Seed UCCCUUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-211
Paralogues Bta-Mir-204-P2 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Cfa-Mir-204-P1  Cja-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Dre-Mir-204-P1a  Dre-Mir-204-P1b  Ebu-Mir-204  Eca-Mir-204-P1  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1a  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Laf-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mal-Mir-204-P1a  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmr-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Neu-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pab-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1a  Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xtr-Mir-204-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037348.1: 27536525-27536582 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAACCUCCCCUGGCUGUGUGACCUGUGGGCUUCCCUUUGUCAUCCUUUGCCCAGGGUUCUGAGUGGGGCAGGGACAGCAAAGGGGUGCUCAGUCGUCACCUCCCACAGCAUGGAGCUU
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Structure
        10          20        30        40        50         
CAACCUCCCCUGGCUGU--|    CUG     U         CA     U    AGGGUU 
                   GUGAC   UGGGC UCCCUUUGU  UCCUU GCCC      \
                   CACUG   ACUCG GGGGAAACG  AGGGA CGGG      C
UUCGAGGUACGACACCCUC^    CUG     U         AC     -    GUGAGU 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-204-P1_5p
mirBase accessionMIMAT0009263
Sequence 
0- UUCCCUUUGUCAUCCUUUGCCC -22
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Proposed targets TargetScanVert: bta-miR-211
Star sequence

Bta-Mir-204-P1_3p*
mirBase accessionNone
Sequence 
37- GCAGGGACAGCAAAGGGGUGC -58
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