MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-204-P1

Family name MIR-204 (all species)
Seed UCCCUUU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-204a-1
Paralogues Aca-Mir-204-P2 
Orthologues Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cja-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Dre-Mir-204-P1a  Dre-Mir-204-P1b  Ebu-Mir-204  Eca-Mir-204-P1  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1a  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Laf-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mal-Mir-204-P1a  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmr-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Neu-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pab-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1a  Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xtr-Mir-204-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343428.1: 107556-107613 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGCUGCCUGGAUCACAUGACCUGUGGGCUUCCCUUUGUCAUCCUAUGCCUGGAGAUCGCAGAGAGGCAGGGACAGCAAAGGGGUGCUCAGCUGUUGUCUCUAACGUCGGUCAGCCA
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Structure
        10          20        30        40        50         
GAGGCUGCCUGGAUCAC--|UG  CUG     U         CA    A     GGAGAU 
                   A  AC   UGGGC UCCCUUUGU  UCCU UGCCU      \
                   U  UG   ACUCG GGGGAAACG  AGGG ACGGA      C
ACCGACUGGCUGCAAUCUC^GU  UCG     U         AC    -     GAGACG 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-204-P1_5p
mirBase accessionMIMAT0021853
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Aca-Mir-204-P1_3p*
mirBase accessionNone
Sequence 
37- GCAGGGACAGCAAAGGGGUGC -58
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