MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-204-P1

Family name MIR-204 (all species)
Seed UCCCUUU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-204-P2 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cja-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Dre-Mir-204-P1a  Dre-Mir-204-P1b  Ebu-Mir-204  Eca-Mir-204-P1  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1a  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mal-Mir-204-P1a  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmr-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Neu-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pab-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1a  Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xtr-Mir-204-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010120.1: 2384900-2384957 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAACUUCACCUGGCCAUGUGACCUGUGGGCUUCCCUUUGUCAUCCUUUGCCUAGGGCUCUGAGUGGGGCAGGGACAGCAAAGGGGUGCUCAGUCGUCACUUCCCACAACACAGAGCUU
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Structure
        10          20        30        40        50         
CAACUUCACCUGGCCAU--|    CUG     U         CA     U    AGGGCU 
                   GUGAC   UGGGC UCCCUUUGU  UCCUU GCCU      \
                   CACUG   ACUCG GGGGAAACG  AGGGA CGGG      C
UUCGAGACACAACACCCUU^    CUG     U         AC     -    GUGAGU 
      110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-204-P1_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUUUGCCU -22
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Star sequence

Laf-Mir-204-P1_3p* (predicted)
mirBase accessionNone
Sequence 
37- GCAGGGACAGCAAAGGGGUGC -58
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