MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-204-P2a

Family name MIR-204 (all species)
Seed UCCCUUU
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xla-Mir-204-P2b 
Orthologues Aca-Mir-204-P2  Ami-Mir-204-P2  Bta-Mir-204-P2  Cfa-Mir-204-P2  Cja-Mir-204-P2  Cli-Mir-204-P2  Cmi-Mir-204-P2  Cpi-Mir-204-P2  Cpo-Mir-204-P2  Dno-Mir-204-P2  Dre-Mir-204-P2  Ebu-Mir-204  Eca-Mir-204-P2  Ete-Mir-204-P2  Gga-Mir-204-P2  Gja-Mir-204-P2  Gmo-Mir-204-P2  Hsa-Mir-204-P2  Laf-Mir-204-P2  Lch-Mir-204-P2  Loc-Mir-204-P2  Mal-Mir-204-P2  Mdo-Mir-204-P2  Mml-Mir-204-P2  Mmr-Mir-204-P2  Mmu-Mir-204-P2  Mun-Mir-204-P2  Neu-Mir-204-P2  Oan-Mir-204-P2  Ocu-Mir-204-P2  Pab-Mir-204-P2  Pbv-Mir-204-P2  Pma-Mir-204  Rno-Mir-204-P2  Sha-Mir-204-P2  Spt-Mir-204-P2  Sto-Mir-204-P2  Tgu-Mir-204-P2  Tni-Mir-204-P2  Xtr-Mir-204-P2 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030724.1: 128264538-128264597 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCAGAUCCUCUUCAUGUGACCUGUGGGCUUCCCUUUGUCAUCCUAUGCCUGAGAAUAUAUGAAGGGGGCUGGGAAGGUAAAGGGACGUUCAGUUGUCAUCACCAACAUCUUUCUCAGC
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Structure
        10          20        30        40        50          
GUGCAGAUCCUCUUCAU--|    CUG     U       GU A     U    GAGAAUA 
                   GUGAC   UGGGC UCCCUUU  C UCCUA GCCU       \
                   UACUG   ACUUG AGGGAAA  G AGGGU CGGG       U
CGACUCUUUCUACAACCAC^    UUG     C       UG A     -    GGAAGUA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-204-P2a_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCUG -23
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Star sequence

Xla-Mir-204-P2a_3p*
mirBase accessionNone
Sequence 
38- GGCUGGGAAGGUAAAGGGACGU -60
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