| MirGeneDB ID | Spt-Mir-204-P2 |
|---|---|
| Family name | MIR-204 (all species) |
| Seed | UCCCUUU |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-204-P1 Spt-Mir-204-P4 |
| Orthologues | Aca-Mir-204-P2 Ami-Mir-204-P2 Bta-Mir-204-P2 Cfa-Mir-204-P2 Cli-Mir-204-P2 Cmi-Mir-204-P2 Cpi-Mir-204-P2 Cpo-Mir-204-P2 Dno-Mir-204-P2 Dre-Mir-204-P2 Ebu-Mir-204 Ete-Mir-204-P2 Gga-Mir-204-P2 Gja-Mir-204-P2 Gmo-Mir-204-P2 Hsa-Mir-204-P2 Lch-Mir-204-P2 Loc-Mir-204-P2 Mal-Mir-204-P2 Mdo-Mir-204-P2 Mml-Mir-204-P2 Mmu-Mir-204-P2 Mun-Mir-204-P2 Oan-Mir-204-P2 Ocu-Mir-204-P2 Pbv-Mir-204-P2 Pma-Mir-204 Rno-Mir-204-P2 Sha-Mir-204-P2 Sto-Mir-204-P2 Tgu-Mir-204-P2 Tni-Mir-204-P2 Xla-Mir-204-P2a Xla-Mir-204-P2b Xtr-Mir-204-P2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01009656.1: 3655356-3655415 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGCACUAUCAAUUCAUGUGAACCGUGGACUUCCCUUUGUCAUCCUAUGCCUGAGAAUAUAUGAAGGGGGCUGGGAAGGCAAAGGGACGUUCAACUGUCAUCACCGGCAUCUUCUCUGAUGet precursor sequence |
| Structure | 10 20 30 40 50 CUGCACUAUCAAUUCAU--| ACCG U A U GAGAAUA GUGA UGGAC UCCCUUUGUC UCCUA GCCU \ UACU ACUUG AGGGAAACGG AGGGU CGGG U UAGUCUCUUCUACGGCCAC^ GUCA C A - GGAAGUA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Spt-Mir-204-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUCCCUUUGUCAUCCUAUGCCU -22
Get sequence
|
| Star sequence | Spt-Mir-204-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- GCUGGGAAGGCAAAGGGACGU -60
Get sequence
|
