MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-204-P4

Family name MIR-204 (all species)
Seed UCCCUUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-204-P1  Sto-Mir-204-P2 
Orthologues Ami-Mir-204-P4  Cli-Mir-204-P4  Cmi-Mir-204-P4  Cpi-Mir-204-P4  Ebu-Mir-204  Gga-Mir-204-P4  Gja-Mir-204-P4  Lch-Mir-204-P4  Mun-Mir-204-P4  Pbv-Mir-204-P4  Pma-Mir-204  Spt-Mir-204-P4  Tgu-Mir-204-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01002899.1: 48427-48482 [-]
Precursor
(pre-Mir +30nt flank)
CAGCUGUGUUUAAUUCUGUGGCCUGUGACCUUCCCUUUGUCAUCCUAUGCCUGGUGUUUGAUGGGGCUGGGACGAUAAGGGGGUGUUCAUCUGUCAUUGCUCCAUCAUGUCCAUUC
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Structure
        10          20        30        40        50        
CAGCUGUGUUUAAUUCU--|    CU    CCU          A     U    GGUGU 
                   GUGGC  GUGA   UCCCUUUGUC UCCUA GCCU     \
                   UACUG  UACU   GGGGGAAUAG AGGGU CGGG     U
CUUACCUGUACUACCUCGU^    UC    UGU          C     -    GUAGU 
    110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-204-P4_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Sto-Mir-204-P4_3p* (predicted)
mirBase accessionNone
Sequence 
35- GCUGGGACGAUAAGGGGGUGU -56
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