| MirGeneDB ID | Sto-Mir-204-P4 |
|---|
| Family name |
MIR-204 (all species) |
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| Seed |
UCCCUUU |
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| Species |
Cloudy Catshark (Scyliorhinus torazame) |
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| MiRBase ID |
|
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| Paralogues |
Sto-Mir-204-P1
Sto-Mir-204-P2
|
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| Orthologues |
Ami-Mir-204-P4
Cli-Mir-204-P4
Cmi-Mir-204-P4
Cpi-Mir-204-P4
Ebu-Mir-204
Gga-Mir-204-P4
Gja-Mir-204-P4
Lch-Mir-204-P4
Mun-Mir-204-P4
Pbv-Mir-204-P4
Pma-Mir-204
Spt-Mir-204-P4
Tgu-Mir-204-P4
|
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| Node of Origin (locus) |
Gnathostomata
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(GCA_003427355_STO_add) |
BFAA01002899.1: 48427-48482 [-]
|
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Precursor
(pre-Mir +30nt flank) |
CAGCUGUGUUUAAUUCUGUGGCCUGUGACCUUCCCUUUGUCAUCCUAUGCCUGGUGUUUGAUGGGGCUGGGACGAUAAGGGGGUGUUCAUCUGUCAUUGCUCCAUCAUGUCCAUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGCUGUGUUUAAUUCU--| CU CCU A U GGUGU
GUGGC GUGA UCCCUUUGUC UCCUA GCCU \
UACUG UACU GGGGGAAUAG AGGGU CGGG U
CUUACCUGUACUACCUCGU^ UC UGU C - GUAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Sto-Mir-204-P4_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUCCCUUUGUCAUCCUAUGCCU -22
Get sequence
|
|---|
| Star sequence |
Sto-Mir-204-P4_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- GCUGGGACGAUAAGGGGGUGU -56
Get sequence
|
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