MirGeneDB 2.1

MirGeneDB ID

Gga-Mir-204-P4

Family name MIR-204 (all species)
Seed UCCCUUU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-211
Paralogues Gga-Mir-204-P1  Gga-Mir-204-P2 
Orthologues Ami-Mir-204-P4  Cli-Mir-204-P4  Cmi-Mir-204-P4  Cpi-Mir-204-P4  Ebu-Mir-204  Gja-Mir-204-P4  Lch-Mir-204-P4  Mun-Mir-204-P4  Pbv-Mir-204-P4  Pma-Mir-204  Spt-Mir-204-P4  Sto-Mir-204-P4  Tgu-Mir-204-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)
28: 2326325-2326382 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGCAGUGCAGCCCCUCGCUCCUGUGAGCUUCCCUUUGUCAUCCUAUGCCUGAGCGAUGCCUGGAGGCUGGGACGGUGAAGGGAGGCCCACGGGCUGCCACGGCCCUGCAGCGAUAC
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Structure
        10         20         30        40        50         
GGAGCAGUGCAGCCCCUC-  U-|     A         UG  A     U    GAGCGA 
                   GC  CCUGUG GCUUCCCUU  UC UCCUA GCCU      \
                   CG  GGGCAC CGGAGGGAA  GG AGGGU CGGA      U
CAUAGCGACGUCCCGGCAC  UC^     C         GU  C     -    GGUCCG 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-204-P4_5p

mirBase accessionMIMAT0003368
Sequence
0- UUCCCUUUGUCAUCCUAUGCCU -22
Get sequence
Proposed targets TargetScanVert: gga-miR-211
miRDB: MIMAT0003368
Star sequence

Gga-Mir-204-P4_3p*

mirBase accessionNone
Sequence
37- GCUGGGACGGUGAAGGGAGGC -58
Get sequence