Mir-204-P4

MirGeneDB ID

Gga-Mir-204-P4

Family name

MIR-204 (all species)

Seed

UCCCUUU

Species

Chicken (Gallus gallus)

MiRBase ID

gga-mir-211

Paralogues

Gga-Mir-204-P1 Gga-Mir-204-P2

Orthologues

Ami-Mir-204-P4 Cli-Mir-204-P4 Cmi-Mir-204-P4 Cpi-Mir-204-P4 Ebu-Mir-204 Gja-Mir-204-P4 Lch-Mir-204-P4 Mun-Mir-204-P4 Pbv-Mir-204-P4 Pma-Mir-204 Spt-Mir-204-P4 Sto-Mir-204-P4 Tgu-Mir-204-P4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(Gallus_gallus.GRCg6a)

28: 2326325-2326382 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GGAGCAGUGCAGCCCCUCGCUCCUGUGAGCUUCCCUUUGUCAUCCUAUGCCUGAGCGAUGCCUGGAGGCUGGGACGGUGAAGGGAGGCCCACGGGCUGCCACGGCCCUGCAGCGAUAC

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Structure

        10         20         30        40        50         
GGAGCAGUGCAGCCCCUC-  U-|     A         UG  A     U    GAGCGA 
                   GC  CCUGUG GCUUCCCUU  UC UCCUA GCCU      \
                   CG  GGGCAC CGGAGGGAA  GG AGGGU CGGA      U
CAUAGCGACGUCCCGGCAC  UC^     C         GU  C     -    GGUCCG 
      110       100        90        80        70         60

Deep sequencing

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3' NTU

Motifs

Tissue expression

Ad	Ad	Ad	Br	Br	Ce	Ce	Ce	Ce	Gg	He	He	Hy	Hy	Ki	Ki	Li	Li	Lu	Lu	Ov	Pr	Pr	Sc	Sc	Sp	Sp	Te

Mature sequence

Gga-Mir-204-P4_5p

mirBase accession

MIMAT0003368

Sequence

0- UUCCCUUUGUCAUCCUAUGCCU -22

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Proposed targets

TargetScanVert: gga-miR-211
miRDB: MIMAT0003368

Star sequence

Gga-Mir-204-P4_3p*

mirBase accession

None

Sequence

37- GCUGGGACGGUGAAGGGAGGC -58

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