MirGeneDB ID | Mun-Mir-204-P4 |
Family name |
MIR-204 (all species) |
Seed |
UCCCUUU |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
Mun-Mir-204-P1
Mun-Mir-204-P2
|
Orthologues |
Ami-Mir-204-P4
Cli-Mir-204-P4
Cmi-Mir-204-P4
Cpi-Mir-204-P4
Ebu-Mir-204
Gga-Mir-204-P4
Gja-Mir-204-P4
Lch-Mir-204-P4
Pbv-Mir-204-P4
Pma-Mir-204
Spt-Mir-204-P4
Sto-Mir-204-P4
Tgu-Mir-204-P4
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (Mun_miRNA_loci) |
204-P3_LR594642.1:78508452-78508709: 101-158 [+]
|
Precursor (pre-Mir +30nt flank) |
CAUUGCCCUUCUACUGUGUGUCUUGUAAGCUUCCCUUUGUCAUCCUAUGCCUGAGCCAUAAAAGGAGGCUGGGAUGGUAAGGGGAGGUCAACAUGACUUCCAGCUGCUAGUCAAGGUU
Get precursor sequence
|
Structure | 10 20 30 40 50
CAUUGCCCUUCUACUGUGU--| U AA GU U GAGCCA
GUC UGU GCUUCCCUUU CAUCCUA GCCU \
CAG ACA UGGAGGGGAA GUAGGGU CGGA U
UUGGAACUGAUCGUCGACCUU^ U AC UG - GGAAAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mun-Mir-204-P4_5p |
mirBase accession | None |
Sequence |
0- UUCCCUUUGUCAUCCUAUGCCU -22
Get sequence
|
Star sequence |
Mun-Mir-204-P4_3p* (predicted) |
mirBase accession | None |
Sequence |
37- GCUGGGAUGGUAAGGGGAGGU -58
Get sequence
|