MirGeneDB 3.0

MirGeneDB ID

Pbv-Mir-204-P4

Family name MIR-204 (all species)
Seed UCCCUUU
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-204-3
Paralogues Pbv-Mir-204-P1  Pbv-Mir-204-P2 
Orthologues Ami-Mir-204-P4  Cli-Mir-204-P4  Cmi-Mir-204-P4  Cpi-Mir-204-P4  Ebu-Mir-204  Gga-Mir-204-P4  Gja-Mir-204-P4  Lch-Mir-204-P4  Mun-Mir-204-P4  Pma-Mir-204  Spt-Mir-204-P4  Sto-Mir-204-P4  Tgu-Mir-204-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE956236.1: 133468-133526 [-]
Precursor
(pre-Mir +30nt flank)
CCACCCACCACCCCGCUUGGCUCUGUAGCUUUCCCUUUGUCAUCCUAUGCCUGAGAAAUUCAGGGAGGCUGGGACGGUGAAGGGAAGCCCACAGCGUUAUAGUUCCAGCUGGAGGAGCA
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Structure
        10           20         30        40        50         
CCACCCACCACCCCGCU---    U    A-|   U     UG  A     U    GAGAAA 
                    UGGC CUGU  GCUU CCCUU  UC UCCUA GCCU      \
                    AUUG GACA  CGAA GGGAA  GG AGGGU CGGA      U
ACGAGGAGGUCGACCUUGAU    C    CC^   -     GU  C     -    GGGACU 
       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Pbv-Mir-204-P4_5p

mirBase accessionMIMAT0039006
Sequence
0- UUCCCUUUGUCAUCCUAUGCCU -22
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Star sequence

Pbv-Mir-204-P4_3p*

mirBase accessionMIMAT0039008
Sequence
37- GCUGGGACGGUGAAGGGAAGCC -59
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