MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-9-P13

Family name MIR-9 (all species)
Seed CUUUGGU
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-9-P10  Gpa-Mir-9-P11  Gpa-Mir-9-P12-v1  Gpa-Mir-9-P12-v2 
Orthologues Aae-Mir-9-P13  Aga-Mir-9-P13  Agr-Mir-9  Bfl-Mir-9  Bge-Mir-9-P13  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P13  Dgr-Mir-9  Dlo-Mir-9-P13  Dme-Mir-9-P13  Dmo-Mir-9-P13  Dsi-Mir-9-P13  Dya-Mir-9-P13  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(GpalI1)		 Scaffold60: 382083-382145 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGUUUUAUUUAUUUUGCAUGUUAUUUGCUCUUUGGUGAUUUUAGCUGUAUGAUUUACAAUUAUAUUCCAUAGAGCUUUAUUACCAAAAACCAAAUGAUUUUUGCUUUAUUUCCAUGUAUCA
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Structure
        10        20          30        40        50        60 
UUUGUUUUAUUUAUUUUGCAU--|       CUC         UUU    G    AUUUACA 
                       GUUAUUUG   UUUGGUGAU   AGCU UAUG       A
                       UAGUAAAC   AAACCAUUA   UCGA AUAC       U
ACUAUGUACCUUUAUUUCGUUUU^       CAA         UU-    G    CUUAUAU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Mature sequence

Gpa-Mir-9-P13_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUGAUUUUAGCUGUAUG -23
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Star sequence

Gpa-Mir-9-P13_3p*
mirBase accessionNone
Sequence 
41- UAGAGCUUUAUUACCAAAAACC -63
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