Mir-33-P3

MirGeneDB ID

Hsa-Mir-33-P3

Family name

MIR-33 (all species)

Seed

UGCAUUG

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-33a

Paralogues

Hsa-Mir-33-P1

Orthologues

Aae-Mir-33 Aca-Mir-33-P3 Aga-Mir-33 Ami-Mir-33-P3 Ava-Mir-33 Bge-Mir-33 Bta-Mir-33-P3 Cfa-Mir-33-P3 Cin-Mir-33 Cja-Mir-33-P3 Cli-Mir-33-P3 Cmi-Mir-33-P3 Cpi-Mir-33-P3 Cpo-Mir-33-P3 Csc-Mir-33 Cte-Mir-33 Dan-Mir-33 Dgr-Mir-33 Dlo-Mir-33 Dma-Mir-33 Dme-Mir-33 Dmo-Mir-33 Dno-Mir-33-P3 Dpu-Mir-33 Dsi-Mir-33 Dya-Mir-33 Eba-Mir-33 Ebu-Mir-33 Eca-Mir-33-P3 Efe-Mir-33 Egr-Mir-33 Esc-Mir-33 Ete-Mir-33-P3 Gga-Mir-33-P3 Gja-Mir-33-P3 Gpa-Mir-33 Gsp-Mir-33 Hru-Mir-33 Isc-Mir-33 Laf-Mir-33-P3 Lch-Mir-33-P3 Lgi-Mir-33 Llo-Mir-33 Loc-Mir-33-P3 Mal-Mir-33-P3 Mdo-Mir-33-P3 Mgi-Mir-33 Mml-Mir-33-P3 Mmr-Mir-33-P3 Mmu-Mir-33-P3 Mom-Mir-33 Mun-Mir-33-P3 Neu-Mir-33-P3 Npo-Mir-33 Oan-Mir-33-P3 Obi-Mir-33 Ocu-Mir-33-P3 Ofu-Mir-33 Ovu-Mir-33 Pab-Mir-33-P3 Pau-Mir-33 Pbv-Mir-33-P3 Pca-Mir-33 Pcr-Mir-33 Pdu-Mir-33 Pfl-Mir-33 Pma-Mir-33-o3 Pmi-Mir-33 Rno-Mir-33-P3 Sha-Mir-33-P3 Sko-Mir-33 Snu-Mir-33 Spt-Mir-33-P3 Spu-Mir-33 Sto-Mir-33-P3 Tca-Mir-33 Tgu-Mir-33-P3 Tni-Mir-33-P3 War-Mir-33 Xbo-Mir-33 Xla-Mir-33-P3a Xla-Mir-33-P3b Xtr-Mir-33-P3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chr22: 41900949-41901009 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UGGCCGCAUACCUCCUGGCGGGCAGCUGUGGUGCAUUGUAGUUGCAUUGCAUGUUCUGGUGGUACCCAUGCAAUGUUUCCACAGUGCAUCACAGAGGCCUGCCUGGCCCUCGAGAGACUGC

Get precursor sequence

Structure

        10          20        30        40        50          
UGGCCGCAUACCUCCUG--|     AG              AGUU        UGUUCUGG 
                   GCGGGC  CUGUGGUGCAUUGU    GCAUUGCA        \
                   CGUCCG  GACACUACGUGACA    UGUAACGU        U
CGUCAGAGAGCUCCCGGUC^     GA              CCUU        ACCCAUGG 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-33-P3_5p

mirBase accession

MIMAT0000091

Sequence

0- GUGCAUUGUAGUUGCAUUGCA -21

Get sequence

Proposed targets

microrna.org: MIMAT0000091
TargetScanVert: hsa-miR-33a-5p
TargetMiner: hsa-miR-33a-5p
miRDB: MIMAT0000091

Star sequence

Hsa-Mir-33-P3_3p*

mirBase accession

MIMAT0004506

Sequence

40- CAAUGUUUCCACAGUGCAUCA -61

Get sequence

Proposed targets

microrna.org: MIMAT0004506
TargetScanVert: hsa-miR-33a-3p
TargetMiner: hsa-miR-33a-3p
miRDB: MIMAT0004506