| MirGeneDB ID | Laf-Mir-345-P2 |
|---|---|
| Family name | MIR-345 (all species) |
| Seed | CUGACUC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-345-P1 Laf-Mir-345-P3 |
| Orthologues | Bta-Mir-345 Cfa-Mir-345 Cja-Mir-345 Cpo-Mir-345 Dno-Mir-345 Eca-Mir-345 Ete-Mir-345 Hsa-Mir-345 Mml-Mir-345 Mmr-Mir-345 Pab-Mir-345 Rno-Mir-345 |
| Node of Origin (locus) | L. africana |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010167.1: 512599-512652 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGCAGCAGCUGGGAUUGGAACCCAGGCUUGGCUGACUCCUAGUCCAGUGCUCUUCCCACACAGAGGCCAGAUCAGGGGCAGCCACAGAAAAGGGCUUGUGUGAAGCAGCCCGGAGet precursor sequence |
| Structure | 10 20 30 40 50 AGCAGCAGCUGGGAUUGGAA AGG- -| A A CAGU CUUCCC CCC CU UGGCUG CUCCU GUC GCU \ GGG GA ACCGAC GGGGA UAG CGG A AGGCCCGACGAAGUGUGUUC AAAA C^ - C AC-- AGACAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Laf-Mir-345-P2_5p |
| mirBase accession | None |
| Sequence |
0- GCUGACUCCUAGUCCAGUGCU -21
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|
| Star sequence | Laf-Mir-345-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
34- GGCCAGAUCAGGGGCAGCCA -54
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|
