MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-345-P3

Family name MIR-345 (all species)
Seed CUGACUC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-345-P1  Laf-Mir-345-P2 
Orthologues Bta-Mir-345  Cfa-Mir-345  Cja-Mir-345  Cpo-Mir-345  Dno-Mir-345  Eca-Mir-345  Ete-Mir-345  Hsa-Mir-345  Mml-Mir-345  Mmr-Mir-345  Pab-Mir-345  Rno-Mir-345 
Node of Origin (locus) L. africana
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 76277022-76277079 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUCGCUAAGCAGAGACCCAACCCAGGUCUGCUGACUCCUAGUCCAGUGCUUGUGAUGGCCAUUGGGCCCUGAACUAGGGGCCUGGAGGCCUGGGUUUGAUUAUCGCCAGCCUCUGAC
Get precursor sequence
Structure
        10          20        30         40        50        
AUUCGCUAAGCAGAGACCC--|          G   A-        C   U   UGUGAU 
                     AACCCAGGUCU CUG  CUCCUAGU CAG GCU      G
                     UUGGGUCCGGA GGU  GGGGAUCA GUC CGG      G
CAGUCUCCGACCGCUAUUAGU^          -   CC        A   C   GUUACC 
      110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-345-P3_5p
mirBase accessionNone
Sequence 
0- GCUGACUCCUAGUCCAGUGCU -21
Get sequence
Star sequence

Laf-Mir-345-P3_3p* (predicted)
mirBase accessionNone
Sequence 
37- CCCUGAACUAGGGGCCUGGAG -58
Get sequence