MirGeneDB ID | Mml-Mir-345 |
Family name |
MIR-345 (all species) |
Seed |
CUGACUC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-345
|
Paralogues |
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Orthologues |
Bta-Mir-345
Cfa-Mir-345
Cja-Mir-345
Cpo-Mir-345
Dno-Mir-345
Eca-Mir-345
Ete-Mir-345
Hsa-Mir-345
Laf-Mir-345-P1
Laf-Mir-345-P2
Laf-Mir-345-P3
Mmr-Mir-345
Mmu-Mir-345-v1
Mmu-Mir-345-v2
Pab-Mir-345
Rno-Mir-345
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014342.1: 162524344-162524401 [+]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
AUGUUAAGCAGAGAUGGAAACCCUAGGUCGGCUGACUCCUAGUCAAGGGCUCGUGGUGGCUGGUGGGCCCUGAACGAGGGGUCUGGAGGCCUGGGUUUGAAUAUCACCAGCCUCUCUG
Get precursor sequence
|
Structure | 10 20 30 40 50
AUGUUAAGCAGAGAUGG---| U GGCU A CA GUGGU
AAACCC AGGUC GACUCCU GU AGGGCUC G
UUUGGG UCCGG CUGGGGA CA UCCCGGG G
GUCUCUCCGACCACUAUAAG^ - AGGU G AG UGGUC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-345_5p |
mirBase accession | MIMAT0006284 |
Sequence |
0- GCUGACUCCUAGUCAAGGGCUC -22
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-345
|
Star sequence |
Mml-Mir-345_3p* (predicted) |
mirBase accession | None |
Sequence |
36- GCCCUGAACGAGGGGUCUGGAG -58
Get sequence
|