MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-345

Family name MIR-345 (all species)
Seed CUGACUC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-345
Paralogues
Orthologues Bta-Mir-345  Cfa-Mir-345  Cja-Mir-345  Cpo-Mir-345  Dno-Mir-345  Eca-Mir-345  Ete-Mir-345  Hsa-Mir-345  Laf-Mir-345-P1  Laf-Mir-345-P2  Laf-Mir-345-P3  Mml-Mir-345  Mmu-Mir-345-v1  Mmu-Mir-345-v2  Pab-Mir-345  Rno-Mir-345 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007663.1: 11068745-11068802 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUUAAGCAGAGACCCAAACCCCAGGUCUGCUGACUCCUAGUCCAGUGCUCGUGAUGGCUGGUGGGCCCUGAACUAGGGGUCUGGAGGCCUGGGUUUGAAUGUCGCCAGCCUCUCUG
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Structure
        10        20          30         40        50        
UCGUUAAGCAGAGACCCAAAC--|        G  -          C   U    GUGAU 
                       CCCAGGUCU CU GACUCCUAGU CAG GCUC     G
                       GGGUCCGGA GG CUGGGGAUCA GUC CGGG     G
GUCUCUCCGACCGCUGUAAGUUU^        -  U          A   C    UGGUC 
      110       100        90         80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-345_5p

mirBase accessionNone
Sequence
0- GCUGACUCCUAGUCCAGUGCUC -22
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Star sequence

Mmr-Mir-345_3p*

mirBase accessionMIMAT0049232
Sequence
36- GCCCUGAACUAGGGGUCUGGAG -58
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