MirGeneDB ID | Mmr-Mir-345 |
Family name |
MIR-345 (all species) |
Seed |
CUGACUC |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
mmr-mir-345
|
Paralogues |
|
Orthologues |
Bta-Mir-345
Cfa-Mir-345
Cja-Mir-345
Cpo-Mir-345
Dno-Mir-345
Eca-Mir-345
Ete-Mir-345
Hsa-Mir-345
Laf-Mir-345-P1
Laf-Mir-345-P2
Laf-Mir-345-P3
Mml-Mir-345
Mmu-Mir-345-v1
Mmu-Mir-345-v2
Pab-Mir-345
Rno-Mir-345
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007663.1: 11068745-11068802 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCGUUAAGCAGAGACCCAAACCCCAGGUCUGCUGACUCCUAGUCCAGUGCUCGUGAUGGCUGGUGGGCCCUGAACUAGGGGUCUGGAGGCCUGGGUUUGAAUGUCGCCAGCCUCUCUG
Get precursor sequence
|
Structure | 10 20 30 40 50
UCGUUAAGCAGAGACCCAAAC--| G - C U GUGAU
CCCAGGUCU CU GACUCCUAGU CAG GCUC G
GGGUCCGGA GG CUGGGGAUCA GUC CGGG G
GUCUCUCCGACCGCUGUAAGUUU^ - U A C UGGUC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Mmr-Mir-345_5p |
mirBase accession | None |
Sequence |
0- GCUGACUCCUAGUCCAGUGCUC -22
Get sequence
|
Star sequence |
Mmr-Mir-345_3p* |
mirBase accession | MIMAT0049232 |
Sequence |
36- GCCCUGAACUAGGGGUCUGGAG -58
Get sequence
|