MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-345-v1

Family name MIR-345 (all species)
Seed CCUGAAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-345
Paralogues Mmu-Mir-345-v2 
Orthologues Bta-Mir-345  Cfa-Mir-345  Cja-Mir-345  Cpo-Mir-345  Dno-Mir-345  Eca-Mir-345  Ete-Mir-345  Hsa-Mir-345  Mml-Mir-345  Mmr-Mir-345  Pab-Mir-345  Rno-Mir-345 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr12: 108836988-108837046 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-345-v1)		 Mir-345-v1 chr12: 108836988-108837046 [+] UCSC Ensembl
Mir-345-v2 chr12: 108836988-108837046 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCGUGAAGCCGACACCCAAGUCCAGGCCUGCUGACCCCUAGUCCAGUGCUUGUGGUGGCUACUGGGCCCUGAACUAGGGGUCUGGAGACCUGGGUUUGAUCUCCACAGGCUUUGAGU
Get precursor sequence
Structure
        10         20        30         40        50         
CUUCGUGAAGCCGACACC-|  GU     C  G  -          C   U   UGUGGU 
                   CAA  CCAGG CU CU GACCCCUAGU CAG GCU      G
                   GUU  GGUCC GA GG CUGGGGAUCA GUC CGG      G
UGAGUUUCGGACACCUCUA^  UG     A  -  U          A   C   GUCAUC 
       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Ce Ce Es Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-345-v1_5p*
mirBase accessionMIMAT0000595
Sequence 
0- UGCUGACCCCUAGUCCAGUGCU -22
Get sequence
Proposed targets microrna.org: MIMAT0000595
miRDB: MIMAT0000595
Mature sequence

Mmu-Mir-345-v1_3p
mirBase accessionMIMAT0004656
Sequence 
38- CCCUGAACUAGGGGUCUGGAG -59
Get sequence
Proposed targets microrna.org: MIMAT0004656
miRDB: MIMAT0004656