MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-345

Family name MIR-345 (all species)
Seed CUGACUC
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-345  Cfa-Mir-345  Cja-Mir-345  Cpo-Mir-345  Dno-Mir-345  Eca-Mir-345  Ete-Mir-345  Hsa-Mir-345  Laf-Mir-345-P1  Laf-Mir-345-P2  Laf-Mir-345-P3  Mml-Mir-345  Mmr-Mir-345  Mmu-Mir-345-v1  Mmu-Mir-345-v2  Rno-Mir-345 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 104732559-104732616 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUUAAGCAGAGACCCAAACCCUAGGUCUGCUGACUCCUAGUCCAGGGCUCGUGAUGGCUGGUGGGCCCUGAACGAGGGGUCUGGAGGCCUGGGUUUGAAUAUCGCCAGCCUCUCUG
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Structure
        10           20        30         40        50        
AUAUUAAGCAGAGACCC---|     U      G  -       A  C        GUGAU 
                    AAACCC AGGUCU CU GACUCCU GU CAGGGCUC     G
                    UUUGGG UCCGGA GG CUGGGGA CA GUCCCGGG     G
GUCUCUCCGACCGCUAUAAG^     -      -  U       G  A        UGGUC 
      110       100         90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-345_5p (predicted)
mirBase accessionNone
Sequence 
0- GCUGACUCCUAGUCCAGGGCUC -22
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Star sequence

Pab-Mir-345_3p* (predicted)
mirBase accessionNone
Sequence 
36- GCCCUGAACGAGGGGUCUGGAG -58
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