| MirGeneDB ID | Eca-Mir-345 |
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| Family name |
MIR-345 (all species) |
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| Seed |
CCUGAAC |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-345
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| Paralogues |
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| Orthologues |
Bta-Mir-345
Cfa-Mir-345
Cja-Mir-345
Cpo-Mir-345
Dno-Mir-345
Ete-Mir-345
Hsa-Mir-345
Laf-Mir-345-P1
Laf-Mir-345-P2
Laf-Mir-345-P3
Mml-Mir-345
Mmr-Mir-345
Mmu-Mir-345-v1
Mmu-Mir-345-v2
Pab-Mir-345
Rno-Mir-345
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009171.1: 42657514-42657571 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCACUAAGCGGAGACCCAACCCCAGGUCUGCUGACUCCUAGUCCAGUGCUCGUGAUGGCUAGUGGGCCCUGAACUAGGGGUCUGGAGGCCUGGGUUUGAAUAUCGCCAGCCACUGAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUCACUAAGCGGAGACC--| C G - C U CGUGAU
CAA CCCAGGUCU CU GACUCCUAGU CAG GCU G
GUU GGGUCCGGA GG CUGGGGAUCA GUC CGG G
CAGUCACCGACCGCUAUAA^ U - U A C GUGAUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
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| Star sequence |
Eca-Mir-345_5p* |
| mirBase accession | MIMAT0013138 |
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| Sequence |
0- GCUGACUCCUAGUCCAGUGCU -21
Get sequence
|
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| Mature sequence |
Eca-Mir-345_3p |
| mirBase accession | MIMAT0013139 |
|---|
| Sequence |
37- CCCUGAACUAGGGGUCUGGAG -58
Get sequence
|
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