MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-135-P2a

Family name MIR-135 (all species)
Seed AUGGCUU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-135-P1  Mal-Mir-135-P2b  Mal-Mir-135-P4a  Mal-Mir-135-P4b 
Orthologues Aca-Mir-135-P2  Ami-Mir-135-P2  Bta-Mir-135-P2  Cfa-Mir-135-P2  Cja-Mir-135-P2  Cli-Mir-135-P2  Cmi-Mir-135-P2  Cpi-Mir-135-P2  Cpo-Mir-135-P2  Dno-Mir-135-P2  Dre-Mir-135-P2a  Eca-Mir-135-P2  Ete-Mir-135-P2  Gga-Mir-135-P2  Gja-Mir-135-P2  Gmo-Mir-135-P2a  Hsa-Mir-135-P2  Laf-Mir-135-P2  Lch-Mir-135-P2  Loc-Mir-135-P2  Mdo-Mir-135-P2  Mml-Mir-135-P2  Mmr-Mir-135-P2  Mmu-Mir-135-P2  Mun-Mir-135-P2  Neu-Mir-135-P2  Oan-Mir-135-P2  Ocu-Mir-135-P2  Pab-Mir-135-P2  Pbv-Mir-135-P2  Pma-Mir-135-o2  Rno-Mir-135-P2  Sha-Mir-135-P2  Spt-Mir-135-P2  Sto-Mir-135-P2  Tgu-Mir-135-P2  Tni-Mir-135-P2a  Xtr-Mir-135-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Chordata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884895.1: 242417-242476 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUGUUUCUACCCGUAUGCCACUGCGUACUAUGGCUUUUUAUUCCUAUGUGAUGAUGAAAAAUGUUCGUGUAGGAAUAGAAGCCGUUAUACACAUGGCGAGAGAGCAACACAACAGAAG
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Structure
        10           20        30        40        50          
AUGUGUUUCUACCCGUA---|    C  C   CU         U       UG   UGAUGA 
                    UGCCA UG GUA  AUGGCUUUU AUUCCUA  UGA      \
                    GCGGU AC CAU  UGCCGAAGA UAAGGAU  GCU      A
GAAGACAACACAACGAGAGA^    -  A   AU         -       GU   UGUAAA 
.       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-135-P2a_5p
mirBase accessionNone
Sequence 
0- UAUGGCUUUUUAUUCCUAUGUGA -23
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Star sequence

Mal-Mir-135-P2a_3p*
mirBase accessionNone
Sequence 
38- GUGUAGGAAUAGAAGCCGUUAU -60
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