MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-135-P1

Family name MIR-135 (all species)
Seed AUGGCUU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-135-P2a  Mal-Mir-135-P2b  Mal-Mir-135-P4a  Mal-Mir-135-P4b 
Orthologues Aca-Mir-135-P1  Ami-Mir-135-P1  Bta-Mir-135-P1  Cfa-Mir-135-P1  Cja-Mir-135-P1  Cli-Mir-135-P1  Cmi-Mir-135-P1  Cpi-Mir-135-P1  Cpo-Mir-135-P1  Dno-Mir-135-P1  Dre-Mir-135-P1  Eca-Mir-135-P1  Ete-Mir-135-P1  Gga-Mir-135-P1  Gja-Mir-135-P1  Gmo-Mir-135-P1  Hsa-Mir-135-P1  Laf-Mir-135-P1  Lch-Mir-135-P1  Loc-Mir-135-P1  Mml-Mir-135-P1  Mmr-Mir-135-P1  Mmu-Mir-135-P1  Mun-Mir-135-P1  Oan-Mir-135-P1  Ocu-Mir-135-P1  Pab-Mir-135-P1  Pbv-Mir-135-P1  Pma-Mir-135-o1  Rno-Mir-135-P1  Spt-Mir-135-P1  Sto-Mir-135-P1  Tgu-Mir-135-P1  Tni-Mir-135-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884993.1: 327112-327171 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUGUCAUCUUCCAAUGCCCAGUGCGCUGUAUGGCUUUUUAUUCCUAUCUGACUGUACUAAUGGUUCAUAUAGGGAUGGAAGCCAUGCAAUGCGCUGGGAGCCCAGCACACUGGACCAU
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Structure
        10          20        30        40        50          
AUUUGUCAUCUUCCAAUG--|        C            U        C   CUGUAC 
                    CCCAGUGCG UGUAUGGCUUUU AUUCCUAU UGA      \
                    GGGUCGCGU ACGUACCGAAGG UAGGGAUA ACU      U
UACCAGGUCACACGACCCGA^        A            -        U   UGGUAA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-135-P1_5p
mirBase accessionNone
Sequence 
0- UAUGGCUUUUUAUUCCUAUCUGA -23
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Star sequence

Mal-Mir-135-P1_3p*
mirBase accessionNone
Sequence 
38- AUAUAGGGAUGGAAGCCAUGCA -60
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