MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-135-P1

Family name MIR-135 (all species)
Seed AUGGCUU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-135-P2  Cmi-Mir-135-P4 
Orthologues Aca-Mir-135-P1  Ami-Mir-135-P1  Bta-Mir-135-P1  Cfa-Mir-135-P1  Cja-Mir-135-P1  Cli-Mir-135-P1  Cpi-Mir-135-P1  Cpo-Mir-135-P1  Dno-Mir-135-P1  Dre-Mir-135-P1  Eca-Mir-135-P1  Ete-Mir-135-P1  Gga-Mir-135-P1  Gja-Mir-135-P1  Gmo-Mir-135-P1  Hsa-Mir-135-P1  Laf-Mir-135-P1  Lch-Mir-135-P1  Loc-Mir-135-P1  Mal-Mir-135-P1  Mml-Mir-135-P1  Mmr-Mir-135-P1  Mmu-Mir-135-P1  Mun-Mir-135-P1  Oan-Mir-135-P1  Ocu-Mir-135-P1  Pab-Mir-135-P1  Pbv-Mir-135-P1  Pma-Mir-135-o1  Rno-Mir-135-P1  Spt-Mir-135-P1  Sto-Mir-135-P1  Tgu-Mir-135-P1  Tni-Mir-135-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635869.1: 7284973-7285032 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUGUGAGGUAAUUUGUCUCCAUUGUGUUCUAUGGCUUUUUAUUCCUAUGUGACUUUAUUUAUGCUUCAUAUAGGGAUGAAAGCCAUGAAAUACACUGUGAACAAUCCAGCGAUGGAUCA
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Structure
        10         20         30        40        50          
GAUGUGAGGUAAUUUGUC-  -| U      C          U            CUUUAU 
                   UC CA UGUGUU UAUGGCUUUU AUUCCUAUGUGA      \
                   AG GU ACAUAA GUACCGAAAG UAGGGAUAUACU      U
ACUAGGUAGCGACCUAACA  U^ C      A          -            UCGUAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-135-P1_5p
mirBase accessionNone
Sequence 
0- UAUGGCUUUUUAUUCCUAUGUGA -23
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Star sequence

Cmi-Mir-135-P1_3p*
mirBase accessionNone
Sequence 
38- AUAUAGGGAUGAAAGCCAUGAA -60
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