MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-135-P1

Family name MIR-135 (all species)
Seed AUGGCUU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-135-1
Paralogues Aca-Mir-135-P2  Aca-Mir-135-P4 
Orthologues Ami-Mir-135-P1  Bta-Mir-135-P1  Cfa-Mir-135-P1  Cja-Mir-135-P1  Cli-Mir-135-P1  Cmi-Mir-135-P1  Cpi-Mir-135-P1  Cpo-Mir-135-P1  Dno-Mir-135-P1  Dre-Mir-135-P1  Eca-Mir-135-P1  Ete-Mir-135-P1  Gga-Mir-135-P1  Gja-Mir-135-P1  Gmo-Mir-135-P1  Hsa-Mir-135-P1  Laf-Mir-135-P1  Lch-Mir-135-P1  Loc-Mir-135-P1  Mal-Mir-135-P1  Mml-Mir-135-P1  Mmr-Mir-135-P1  Mmu-Mir-135-P1  Mun-Mir-135-P1  Oan-Mir-135-P1  Ocu-Mir-135-P1  Pab-Mir-135-P1  Pbv-Mir-135-P1  Pma-Mir-135-o1  Rno-Mir-135-P1  Spt-Mir-135-P1  Sto-Mir-135-P1  Tgu-Mir-135-P1  Tni-Mir-135-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(anoCar2)		 2: 153285359-153285419 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-135-P1)		 Mir-135-P1 2: 153285359-153285419 [+] UCSC Ensembl
Let-7-P2c3 2: 153332770-153332847 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGUGCUACCAGUAUGCCCCAUUGUCUUCUAUGGCUUUUUAUUCCUAUGUGAUUAUAUCACUAAUUUCAUAUAGGGAUUGAAGCCAUGUAAUACGCUGGGGAUUUGCAACAAAGAAUGCU
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Structure
        10          20        30        40        50        60
CUGGUGCUACCAGUAUG--|    U   C  C         UU            UUAUAU 
                   CCCCA UGU UU UAUGGCUUU  AUUCCUAUGUGA      C
                   GGGGU GCA AA GUACCGAAG  UAGGGAUAUACU      A
UCGUAAGAAACAACGUUUA^    C   U  U         U-            UUAAUC 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-135-P1_5p
mirBase accessionMIMAT0021750
Sequence 
0- UAUGGCUUUUUAUUCCUAUGUGA -23
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Star sequence

Aca-Mir-135-P1_3p*
mirBase accessionMIMAT0021751
Sequence 
39- AUAUAGGGAUUGAAGCCAUGUA -61
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