MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-135-P1

Family name MIR-135 (all species)
Seed AUGGCUU
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-135-1
Paralogues Pbv-Mir-135-P2  Pbv-Mir-135-P4 
Orthologues Aca-Mir-135-P1  Ami-Mir-135-P1  Bta-Mir-135-P1  Cfa-Mir-135-P1  Cja-Mir-135-P1  Cli-Mir-135-P1  Cmi-Mir-135-P1  Cpi-Mir-135-P1  Cpo-Mir-135-P1  Dno-Mir-135-P1  Dre-Mir-135-P1  Eca-Mir-135-P1  Ete-Mir-135-P1  Gga-Mir-135-P1  Gja-Mir-135-P1  Gmo-Mir-135-P1  Hsa-Mir-135-P1  Laf-Mir-135-P1  Lch-Mir-135-P1  Loc-Mir-135-P1  Mal-Mir-135-P1  Mml-Mir-135-P1  Mmr-Mir-135-P1  Mmu-Mir-135-P1  Mun-Mir-135-P1  Oan-Mir-135-P1  Ocu-Mir-135-P1  Pab-Mir-135-P1  Pma-Mir-135-o1  Rno-Mir-135-P1  Spt-Mir-135-P1  Sto-Mir-135-P1  Tgu-Mir-135-P1  Tni-Mir-135-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE958355.1: 30933-30993 [-]
Precursor
(pre-Mir +30nt flank)
AAUGGAUACACCAUUUAUCCCAUUGUCUUCUAUGGCUUUUUAUUCCUAUGUGAUUAUAUUGCUAAUUUCAUAUAGGGAUUGAAGCCAUGCAAUACACUGGGGACUUGCAACAGAGGAUGUU
Get precursor sequence
Structure
        10          20        30        40        50        60
AAUGGAUACACCAUUUA--|    U   C  C         UU            UUAUAU 
                   UCCCA UGU UU UAUGGCUUU  AUUCCUAUGUGA      U
                   GGGGU ACA AA GUACCGAAG  UAGGGAUAUACU      G
UUGUAGGAGACAACGUUCA^    C   U  C         U-            UUAAUC 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-135-P1_5p
mirBase accessionMIMAT0038941
Sequence 
0- UAUGGCUUUUUAUUCCUAUGUGA -23
Get sequence
Star sequence

Pbv-Mir-135-P1_3p*
mirBase accessionMIMAT0038942
Sequence 
39- AUAUAGGGAUUGAAGCCAUGCA -61
Get sequence