MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-135-P1

Family name MIR-135 (all species)
Seed AUGGCUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-135-P2  Sto-Mir-135-P4 
Orthologues Aca-Mir-135-P1  Ami-Mir-135-P1  Bta-Mir-135-P1  Cfa-Mir-135-P1  Cja-Mir-135-P1  Cli-Mir-135-P1  Cmi-Mir-135-P1  Cpi-Mir-135-P1  Cpo-Mir-135-P1  Dno-Mir-135-P1  Dre-Mir-135-P1  Eca-Mir-135-P1  Ete-Mir-135-P1  Gga-Mir-135-P1  Gja-Mir-135-P1  Gmo-Mir-135-P1  Hsa-Mir-135-P1  Laf-Mir-135-P1  Lch-Mir-135-P1  Loc-Mir-135-P1  Mal-Mir-135-P1  Mml-Mir-135-P1  Mmr-Mir-135-P1  Mmu-Mir-135-P1  Mun-Mir-135-P1  Oan-Mir-135-P1  Ocu-Mir-135-P1  Pab-Mir-135-P1  Pbv-Mir-135-P1  Pma-Mir-135-o1  Rno-Mir-135-P1  Spt-Mir-135-P1  Tgu-Mir-135-P1  Tni-Mir-135-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(GCA_003427355_STO_add)		 BFAA01001833.1: 127580-127639 [-]
Precursor
(pre-Mir +30nt flank)
GAUACAGAAUAAUUUGUCUCCAUUGUGUUCUAUGGCUUUUUAUUCCUAUGUGAUUUGACACAUGCUUCAUAUAGGGAUGAAAGCCAUGAAAUGUACUGUGAGCAAUCCAACAGAGGAUGG
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Structure
        10         20         30        40        50          
GAUACAGAAUAAUUUGU-   -| U  UG  C          U            UUUGAC 
                  CUC CA UG  UU UAUGGCUUUU AUUCCUAUGUGA      \
                  GAG GU AU  AA GUACCGAAAG UAGGGAUAUACU      A
GGUAGGAGACAACCUAAC   U^ C  GU  A          -            UCGUAC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-135-P1_5p
mirBase accessionNone
Sequence 
0- UAUGGCUUUUUAUUCCUAUGUGA -23
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Star sequence

Sto-Mir-135-P1_3p*
mirBase accessionNone
Sequence 
38- AUAUAGGGAUGAAAGCCAUGAA -60
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