MirGeneDB ID | Mun-Mir-27-P2 |
Family name |
MIR-27 (all species) |
Seed |
UCACAGU |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aca-Mir-27-P2
Ami-Mir-27-P2
Bta-Mir-27-P2
Cfa-Mir-27-P2
Cja-Mir-27-P2
Cli-Mir-27-P2
Cmi-Mir-27-P2
Cpi-Mir-27-P2
Cpo-Mir-27-P2
Dno-Mir-27-P2
Dre-Mir-27-P2a
Dre-Mir-27-P2b
Eca-Mir-27-P2
Ete-Mir-27-P2
Gga-Mir-27-P2
Gja-Mir-27-P2
Gmo-Mir-27-P2b
Hsa-Mir-27-P2
Laf-Mir-27-P2
Lch-Mir-27-P2
Loc-Mir-27-P2
Mal-Mir-27-P2a
Mal-Mir-27-P2b
Mdo-Mir-27-P2
Mml-Mir-27-P2
Mmr-Mir-27-P2
Mmu-Mir-27-P2
Neu-Mir-27-P2
Oan-Mir-27-P2
Ocu-Mir-27-P2
Pab-Mir-27-P2
Pbv-Mir-27-P2
Pma-Mir-27-o2
Rno-Mir-27-P2
Sha-Mir-27-P2
Spt-Mir-27-P2
Sto-Mir-27-P2
Tgu-Mir-27-P2
Tni-Mir-27-P2b
Xla-Mir-27-P2c
Xla-Mir-27-P2d
Xtr-Mir-27-P2
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (Mun_miRNA_loci) |
27-P2_LR594633.1:206442922-206443060: 39-101 [-]
|
Precursor (pre-Mir +30nt flank) |
UCUGGGACCCUGGCCUUUCUAGUGAGGUGCAGAGCUUAGCUGAUUGGUGAACAGUGAUUGCUUUCCUCUUUGUUCACAGUGGCUAAGUUCUGCACCUGAAGAGAGGGUGAGAGGGAACAUUUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UCUGGGACCCUGGCCUU--| AGUG AUUG GUGAUUGC
UCU AGGUGCAGAGCUUAGCUG GUGAACA \
AGA UCCACGUCUUGAAUCGGU CACUUGU U
UUUUACAAGGGAGAGUGGG^ GAAG GA-- UUCUCCUU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UGUG in loop |
Tissue expression
|
|
Star sequence |
Mun-Mir-27-P2_5p* |
mirBase accession | None |
Sequence |
0- AGAGCUUAGCUGAUUGGUGAACA -23
Get sequence
|
Mature sequence |
Mun-Mir-27-P2_3p |
mirBase accession | None |
Sequence |
42- UUCACAGUGGCUAAGUUCUGC -63
Get sequence
|