MirGeneDB ID | Neu-Mir-203-v1 |
Family name |
MIR-203 (all species) |
Seed |
UGAAAUG |
Species |
Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID |
|
Paralogues |
Neu-Mir-203-v2
|
Orthologues |
Aca-Mir-203-v1
Ami-Mir-203-v1
Bta-Mir-203-v1
Cfa-Mir-203-v1
Cja-Mir-203-v1
Cpi-Mir-203-v1
Cpo-Mir-203-v1
Dno-Mir-203-v1
Eca-Mir-203-v1
Ete-Mir-203-v1
Gga-Mir-203-v1
Gja-Mir-203-v1
Hsa-Mir-203-v1
Lch-Mir-203
Loc-Mir-203-v1
Mdo-Mir-203-v1
Mml-Mir-203-v1
Mmr-Mir-203-v1
Mmu-Mir-203-v1
Mun-Mir-203-v1
Oan-Mir-203-v1
Ocu-Mir-203-v1
Pab-Mir-203-v1
Pbv-Mir-203-v1
Rno-Mir-203-v1
Sha-Mir-203-v1
Spt-Mir-203
Sto-Mir-203-v1
Tgu-Mir-203-v1
Xtr-Mir-203-v1
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 348415203-348415262 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCGACCCGGAUCCUCAGCUUCUCUGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUAUUAAAAAAUUGUGAAAUGUUUAGGACCACUCGAUCAGGGCAGGCCUCAGCAGCCGCAGCGGA
Get precursor sequence
|
Structure | 10 20 30 40 50
UUCGACCCGGAUCCUCA- -| GC U G A UUCUAU
GCUU CUCUGGU AGUGGUUCU AACA UUCA CAG \
CGGA GGGACUA UCACCAGGA UUGU AAGU GUU U
AGGCGACGCCGACGACUC C^ GC U A - AAAAAA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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Star sequence |
Neu-Mir-203-v1_5p* |
mirBase accession | None |
Sequence |
0- AGUGGUUCUUAACAGUUCAACAG -23
Get sequence
|
Mature sequence |
Neu-Mir-203-v1_3p |
mirBase accession | None |
Sequence |
38- GUGAAAUGUUUAGGACCACUCG -60
Get sequence
|