MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-203-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-203-v2 
Orthologues Aca-Mir-203-v1  Ami-Mir-203-v1  Bta-Mir-203-v1  Cfa-Mir-203-v1  Cja-Mir-203-v1  Cpi-Mir-203-v1  Cpo-Mir-203-v1  Dno-Mir-203-v1  Eca-Mir-203-v1  Ete-Mir-203-v1  Gga-Mir-203-v1  Gja-Mir-203-v1  Hsa-Mir-203-v1  Lch-Mir-203  Loc-Mir-203-v1  Mdo-Mir-203-v1  Mml-Mir-203-v1  Mmr-Mir-203-v1  Mmu-Mir-203-v1  Mun-Mir-203-v1  Oan-Mir-203-v1  Ocu-Mir-203-v1  Pab-Mir-203-v1  Pbv-Mir-203-v1  Rno-Mir-203-v1  Sha-Mir-203-v1  Spt-Mir-203  Sto-Mir-203-v1  Tgu-Mir-203-v1  Xtr-Mir-203-v1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051813.1: 348415203-348415262 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCGACCCGGAUCCUCAGCUUCUCUGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUAUUAAAAAAUUGUGAAAUGUUUAGGACCACUCGAUCAGGGCAGGCCUCAGCAGCCGCAGCGGA
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Structure
        10         20         30        40        50          
UUCGACCCGGAUCCUCA-    -|      GC         U    G    A   UUCUAU 
                  GCUU CUCUGGU  AGUGGUUCU AACA UUCA CAG      \
                  CGGA GGGACUA  UCACCAGGA UUGU AAGU GUU      U
AGGCGACGCCGACGACUC    C^      GC         U    A    -   AAAAAA 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-203-v1_5p*

mirBase accessionNone
Sequence
0- AGUGGUUCUUAACAGUUCAACAG -23
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Mature sequence

Neu-Mir-203-v1_3p

mirBase accessionNone
Sequence
38- GUGAAAUGUUUAGGACCACUCG -60
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