MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-203-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-203
Paralogues Mdo-Mir-203-v2 
Orthologues Aca-Mir-203-v1  Ami-Mir-203-v1  Bta-Mir-203-v1  Cfa-Mir-203-v1  Cja-Mir-203-v1  Cpi-Mir-203-v1  Cpo-Mir-203-v1  Dno-Mir-203-v1  Eca-Mir-203-v1  Ete-Mir-203-v1  Gga-Mir-203-v1  Gja-Mir-203-v1  Hsa-Mir-203-v1  Lch-Mir-203  Loc-Mir-203-v1  Mml-Mir-203-v1  Mmr-Mir-203-v1  Mmu-Mir-203-v1  Mun-Mir-203-v1  Neu-Mir-203-v1  Oan-Mir-203-v1  Ocu-Mir-203-v1  Pab-Mir-203-v1  Pbv-Mir-203-v1  Rno-Mir-203-v1  Sha-Mir-203-v1  Spt-Mir-203  Sto-Mir-203-v1  Tgu-Mir-203-v1  Xtr-Mir-203-v1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 1: 311187378-311187437 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-203-v1)		 Mir-203-v1 1: 311187378-311187437 [-] UCSC Ensembl
Mir-203-v2 1: 311187378-311187437 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUCGACCCAGACUCAGCUGCCCUGGUCCAGUGGUUCUUAACAGUUCAACAGUUCUGUGUAGAGAUUGUGAAAUGUUUAGGACCACUUGAUCUGGGUAGGCAUCUUCUGCCGGCAGACC
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Structure
        10          20        30        40        50          
UUUUCGACCCAGACUCAG--|     U    C         U    G    A   UUCUGU 
                    CUGCCC GGUC AGUGGUUCU AACA UUCA CAG      \
                    GAUGGG CUAG UCACCAGGA UUGU AAGU GUU      G
CCAGACGGCCGUCUUCUACG^     U    U         U    A    -   AGAGAU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Star sequence

Mdo-Mir-203-v1_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUUAACAGUUCAACAG -23
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Mature sequence

Mdo-Mir-203-v1_3p
mirBase accessionMIMAT0004126
Sequence 
38- GUGAAAUGUUUAGGACCACUUG -60
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Proposed targets TargetScanVert: mdo-miR-203