MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-203-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-203-v2 
Orthologues Aca-Mir-203-v1  Ami-Mir-203-v1  Bta-Mir-203-v1  Cfa-Mir-203-v1  Cja-Mir-203-v1  Cpi-Mir-203-v1  Cpo-Mir-203-v1  Dno-Mir-203-v1  Eca-Mir-203-v1  Ete-Mir-203-v1  Gga-Mir-203-v1  Gja-Mir-203-v1  Hsa-Mir-203-v1  Lch-Mir-203  Loc-Mir-203-v1  Mdo-Mir-203-v1  Mml-Mir-203-v1  Mmr-Mir-203-v1  Mmu-Mir-203-v1  Mun-Mir-203-v1  Neu-Mir-203-v1  Oan-Mir-203-v1  Ocu-Mir-203-v1  Pab-Mir-203-v1  Pbv-Mir-203-v1  Rno-Mir-203-v1  Sha-Mir-203-v1  Spt-Mir-203  Tgu-Mir-203-v1  Xtr-Mir-203-v1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01000935.1: 614426-614485 [-]
Precursor
(pre-Mir +30nt flank)
UCGCUUAUUGGCCACAAGUCCUCCUGGUGGAGUGGUUCUAAACAGUUCAACAGUUCUCUAUCGACAUUGUGAAAUGUUUAGGACCACUUGAUCCGCAGGGCACUGACCGCCAGACACGGG
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Structure
        10          20        30        40        50          
UCGCUUAUUGGCCACAA--|    CCU   G               G    A   UUCUCU 
                   GUCCU   GGU GAGUGGUUCUAAACA UUCA CAG      \
                   CGGGA   CUA UUCACCAGGAUUUGU AAGU GUU      A
GGGCACAGACCGCCAGUCA^    CGC   G               A    -   ACAGCU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Sto-Mir-203-v1_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUAAACAGUUCAACAG -23
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Mature sequence

Sto-Mir-203-v1_3p
mirBase accessionNone
Sequence 
38- GUGAAAUGUUUAGGACCACUUG -60
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