MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-203-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-203-v2 
Orthologues Aca-Mir-203-v1  Ami-Mir-203-v1  Bta-Mir-203-v1  Cfa-Mir-203-v1  Cja-Mir-203-v1  Cpi-Mir-203-v1  Cpo-Mir-203-v1  Dno-Mir-203-v1  Eca-Mir-203-v1  Ete-Mir-203-v1  Gga-Mir-203-v1  Hsa-Mir-203-v1  Lch-Mir-203  Loc-Mir-203-v1  Mdo-Mir-203-v1  Mml-Mir-203-v1  Mmr-Mir-203-v1  Mmu-Mir-203-v1  Mun-Mir-203-v1  Neu-Mir-203-v1  Oan-Mir-203-v1  Ocu-Mir-203-v1  Pab-Mir-203-v1  Pbv-Mir-203-v1  Rno-Mir-203-v1  Sha-Mir-203-v1  Spt-Mir-203  Sto-Mir-203-v1  Tgu-Mir-203-v1  Xtr-Mir-203-v1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015170282.1: 207477-207536 [-]
Precursor
(pre-Mir +30nt flank)
AAGCGACUCCGACAGCAGCCCCCUGGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUGUAGCAUAAUUGUGAAAUGUUUAGGACCACUUGAGCCGGGGCGGCCUGGGCACCGCCGAGGAG
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Structure
        10         20         30         40        50          
AAGCGACUCCGACAGCA-   -|     GUG  -        U    G    A   UUCUGU 
                  GCC CCCUGG   CA GUGGUUCU AACA UUCA CAG      \
                  CGG GGGGCC   GU CACCAGGA UUGU AAGU GUU      A
GAGGAGCCGCCACGGGUC   C^     GA-  U        U    A    -   AAUACG 
.       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Gja-Mir-203-v1_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUUAACAGUUCAACAG -23
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Mature sequence

Gja-Mir-203-v1_3p
mirBase accessionNone
Sequence 
38- GUGAAAUGUUUAGGACCACUUG -60
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