MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-203-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-203-v2 
Orthologues Aca-Mir-203-v1  Ami-Mir-203-v1  Bta-Mir-203-v1  Cfa-Mir-203-v1  Cja-Mir-203-v1  Cpi-Mir-203-v1  Cpo-Mir-203-v1  Dno-Mir-203-v1  Eca-Mir-203-v1  Ete-Mir-203-v1  Gga-Mir-203-v1  Gja-Mir-203-v1  Hsa-Mir-203-v1  Lch-Mir-203  Mdo-Mir-203-v1  Mml-Mir-203-v1  Mmr-Mir-203-v1  Mmu-Mir-203-v1  Mun-Mir-203-v1  Neu-Mir-203-v1  Oan-Mir-203-v1  Ocu-Mir-203-v1  Pab-Mir-203-v1  Pbv-Mir-203-v1  Rno-Mir-203-v1  Sha-Mir-203-v1  Spt-Mir-203  Sto-Mir-203-v1  Tgu-Mir-203-v1  Xtr-Mir-203-v1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG7: 17096511-17096569 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUAGCUGGAUUUUCUGUCUCUCUGGUGCAGUGGUUCUAAACAGUUCAACAGUUCUUACCAAAAUUGUGAAAUGUUUAGGACCACUUGAUCAGGGGGAUGAUAGCCUCAAAUGAGAGA
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Structure
        10          20        30        40        50         
GAGUAGCUGGAUUUUCU--|          GC              G    A   UUCUU 
                   GUCUCUCUGGU  AGUGGUUCUAAACA UUCA CAG     A
                   UAGGGGGACUA  UCACCAGGAUUUGU AAGU GUU     C
AGAGAGUAAACUCCGAUAG^          GU              A    -   AAAAC 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-203-v1_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUAAACAGUUCAACAG -23
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Mature sequence

Loc-Mir-203-v1_3p
mirBase accessionNone
Sequence 
37- GUGAAAUGUUUAGGACCACUUG -59
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