MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-203-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-203-v1 
Orthologues Aca-Mir-203-v2  Ami-Mir-203-v2  Bta-Mir-203-v2  Cfa-Mir-203-v2  Cja-Mir-203-v2  Cpi-Mir-203-v2  Cpo-Mir-203-v2  Dno-Mir-203-v2  Eca-Mir-203-v2  Ete-Mir-203-v2  Gga-Mir-203-v2  Gja-Mir-203-v2  Hsa-Mir-203-v2  Lch-Mir-203  Mdo-Mir-203-v2  Mml-Mir-203-v2  Mmr-Mir-203-v2  Mmu-Mir-203-v2  Mun-Mir-203-v2  Neu-Mir-203-v2  Oan-Mir-203-v2  Ocu-Mir-203-v2  Pab-Mir-203-v2  Pbv-Mir-203-v2  Rno-Mir-203-v2  Sha-Mir-203-v2  Spt-Mir-203  Sto-Mir-203-v2  Tgu-Mir-203-v2  Xtr-Mir-203-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG7: 17096511-17096569 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUAGCUGGAUUUUCUGUCUCUCUGGUGCAGUGGUUCUAAACAGUUCAACAGUUCUUACCAAAAUUGUGAAAUGUUUAGGACCACUUGAUCAGGGGGAUGAUAGCCUCAAAUGAGAGA
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Structure
        10          20        30        40        50         
GAGUAGCUGGAUUUUCU--|          GC              G    A  GUUCUU 
                   GUCUCUCUGGU  AGUGGUUCUAAACA UUCA CA      A
                   UAGGGGGACUA  UCACCAGGAUUUGU AAGU GU      C
AGAGAGUAAACUCCGAUAG^          GU              A    -  UAAAAC 
       110       100        90        80        70         60
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-203-v2_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUAAACAGUUCAACA -22
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Mature sequence

Loc-Mir-203-v2_3p
mirBase accessionNone
Sequence 
38- UGAAAUGUUUAGGACCACUUG -59
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