MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-203-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-203-v1 
Orthologues Aca-Mir-203-v2  Ami-Mir-203-v2  Bta-Mir-203-v2  Cfa-Mir-203-v2  Cja-Mir-203-v2  Cpi-Mir-203-v2  Cpo-Mir-203-v2  Dno-Mir-203-v2  Eca-Mir-203-v2  Ete-Mir-203-v2  Gga-Mir-203-v2  Gja-Mir-203-v2  Hsa-Mir-203-v2  Lch-Mir-203  Loc-Mir-203-v2  Mdo-Mir-203-v2  Mml-Mir-203-v2  Mmr-Mir-203-v2  Mmu-Mir-203-v2  Mun-Mir-203-v2  Neu-Mir-203-v2  Oan-Mir-203-v2  Ocu-Mir-203-v2  Pbv-Mir-203-v2  Rno-Mir-203-v2  Sha-Mir-203-v2  Spt-Mir-203  Sto-Mir-203-v2  Tgu-Mir-203-v2  Xtr-Mir-203-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 108575160-108575219 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACGGUGUUGGGGACUCGCGCGCUGGGUCCAGUGGUUCUUAACAGUUCAACAGUUCUGUAGCGCAAUUGUGAAAUGUUUAGGACCACUAGACCCGGCGGGCACGGCGACAGCGACGGAGC
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Structure
        10          20        30        40        50          
GACGGUGUUGGGGACUC--| G         C         U    G    A  GUUCUGU 
                   GC CGCUGGGUC AGUGGUUCU AACA UUCA CA       \
                   CG GCGGCCCAG UCACCAGGA UUGU AAGU GU       A
CGAGGCAGCGACAGCGGCA^ G         A         U    A    -  UAACGCG 
.       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-203-v2_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUUAACAGUUCAACA -22
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Mature sequence

Pab-Mir-203-v2_3p
mirBase accessionNone
Sequence 
39- UGAAAUGUUUAGGACCACUAG -60
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