| MirGeneDB ID | Cja-Mir-203-v2 |
|---|---|
| Family name | MIR-203 (all species) |
| Seed | GAAAUGU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-203-v1 |
| Orthologues | Aca-Mir-203-v2 Ami-Mir-203-v2 Bta-Mir-203-v2 Cfa-Mir-203-v2 Cpi-Mir-203-v2 Cpo-Mir-203-v2 Dno-Mir-203-v2 Eca-Mir-203-v2 Ete-Mir-203-v2 Gga-Mir-203-v2 Gja-Mir-203-v2 Hsa-Mir-203-v2 Lch-Mir-203 Loc-Mir-203-v2 Mdo-Mir-203-v2 Mml-Mir-203-v2 Mmr-Mir-203-v2 Mmu-Mir-203-v2 Mun-Mir-203-v2 Neu-Mir-203-v2 Oan-Mir-203-v2 Ocu-Mir-203-v2 Pab-Mir-203-v2 Pbv-Mir-203-v2 Rno-Mir-203-v2 Sha-Mir-203-v2 Spt-Mir-203 Sto-Mir-203-v2 Tgu-Mir-203-v2 Xtr-Mir-203-v2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 134858047-134858106 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GACGGUGUCGCGGACUCGCGCGCUGGGUCCAGUGGUUCUUAACAGUUCAACAGUUCUGUGGCGCAAUUGUGAAAUGUUUAGGACCACUAGACCCGGCGGGCCCGGCGACGGCGACAGCGAGet precursor sequence |
| Structure | 10 20 30 40 50 GACGGUGUCGCGGACUC--| G C U G ACAGUUCUG GC CGCUGGGUC AGUGGUUCU AACA UUCA U CG GCGGCCCAG UCACCAGGA UUGU AAGU G AGCGACAGCGGCAGCGGCC^ G A U A GUUAACGCG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-203-v2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGUGGUUCUUAACAGUUCAAC -21
Get sequence
|
| Mature sequence | Cja-Mir-203-v2_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UGAAAUGUUUAGGACCACUAG -60
Get sequence
|
