MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-203-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-203a
Paralogues Hsa-Mir-203-v1 
Orthologues Aca-Mir-203-v2  Ami-Mir-203-v2  Bta-Mir-203-v2  Cfa-Mir-203-v2  Cja-Mir-203-v2  Cpi-Mir-203-v2  Cpo-Mir-203-v2  Dno-Mir-203-v2  Eca-Mir-203-v2  Ete-Mir-203-v2  Gga-Mir-203-v2  Gja-Mir-203-v2  Lch-Mir-203  Loc-Mir-203-v2  Mdo-Mir-203-v2  Mml-Mir-203-v2  Mmr-Mir-203-v2  Mmu-Mir-203-v2  Mun-Mir-203-v2  Neu-Mir-203-v2  Oan-Mir-203-v2  Ocu-Mir-203-v2  Pab-Mir-203-v2  Pbv-Mir-203-v2  Rno-Mir-203-v2  Sha-Mir-203-v2  Spt-Mir-203  Sto-Mir-203-v2  Tgu-Mir-203-v2  Xtr-Mir-203-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(hg38)
chr14: 104117431-104117490 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-203-v2)
Mir-203-v1 chr14: 104117431-104117490 [+] UCSC Ensembl
Mir-203-v2 chr14: 104117431-104117490 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACGGUGUUGGGGACUCGCGCGCUGGGUCCAGUGGUUCUUAACAGUUCAACAGUUCUGUAGCGCAAUUGUGAAAUGUUUAGGACCACUAGACCCGGCGGGCGCGGCGACAGCGACGGAGC
Get precursor sequence
Structure
        10          20        30        40        50          
GACGGUGUUGGGGACUC--| G         C         U    G    A  GUUCUGU 
                   GC CGCUGGGUC AGUGGUUCU AACA UUCA CA       \
                   CG GCGGCCCAG UCACCAGGA UUGU AAGU GU       A
CGAGGCAGCGACAGCGGCG^ G         A         U    A    -  UAACGCG 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-203-v2_5p*

mirBase accessionMIMAT0031890
Sequence
0- AGUGGUUCUUAACAGUUCAACA -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-203a-5p
miRDB: MIMAT0031890
Mature sequence

Hsa-Mir-203-v2_3p

mirBase accessionMIMAT0000264
Sequence
39- UGAAAUGUUUAGGACCACUAG -60
Get sequence
Proposed targets microrna.org: MIMAT0000264
miRDB: MIMAT0000264