MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-203-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-203
Paralogues Cfa-Mir-203-v1 
Orthologues Aca-Mir-203-v2  Ami-Mir-203-v2  Bta-Mir-203-v2  Cja-Mir-203-v2  Cpi-Mir-203-v2  Cpo-Mir-203-v2  Dno-Mir-203-v2  Eca-Mir-203-v2  Ete-Mir-203-v2  Gga-Mir-203-v2  Gja-Mir-203-v2  Hsa-Mir-203-v2  Lch-Mir-203  Loc-Mir-203-v2  Mdo-Mir-203-v2  Mml-Mir-203-v2  Mmr-Mir-203-v2  Mmu-Mir-203-v2  Mun-Mir-203-v2  Neu-Mir-203-v2  Oan-Mir-203-v2  Ocu-Mir-203-v2  Pab-Mir-203-v2  Pbv-Mir-203-v2  Rno-Mir-203-v2  Sha-Mir-203-v2  Spt-Mir-203  Sto-Mir-203-v2  Tgu-Mir-203-v2  Xtr-Mir-203-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr8: 71774264-71774323 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-203-v2)		 Mir-203-v1 chr8: 71774264-71774323 [+] UCSC Ensembl
Mir-203-v2 chr8: 71774264-71774323 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCCCGCGGACUUCCCGGCGCGCUGGGUCCAGUGGUUCUUAACAGUUCAACAGUUCUGUAGCGCAAUUGUGAAAUGUUUAGGACCACUAGCCCCGGCGGGCCCGGCGGCGGCGGCCGGAC
Get precursor sequence
Structure
        10          20        30        40        50          
CGCCCGCGGACUUCCCG--| G       UCC         U    G    A  GUUCUGU 
                   GC CGCUGGG   AGUGGUUCU AACA UUCA CA       \
                   CG GCGGCCC   UCACCAGGA UUGU AAGU GU       A
CAGGCCGGCGGCGGCGGCC^ G       CGA         U    A    -  UAACGCG 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-203-v2_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUUAACAGUUCAACA -22
Get sequence
Mature sequence

Cfa-Mir-203-v2_3p
mirBase accessionMIMAT0009866
Sequence 
39- UGAAAUGUUUAGGACCACUAG -60
Get sequence
Proposed targets TargetScanVert: cfa-miR-203
miRDB: MIMAT0009866