MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-203-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-203-v1 
Orthologues Aca-Mir-203-v2  Ami-Mir-203-v2  Bta-Mir-203-v2  Cfa-Mir-203-v2  Cja-Mir-203-v2  Cpi-Mir-203-v2  Cpo-Mir-203-v2  Dno-Mir-203-v2  Eca-Mir-203-v2  Ete-Mir-203-v2  Gga-Mir-203-v2  Hsa-Mir-203-v2  Lch-Mir-203  Loc-Mir-203-v2  Mdo-Mir-203-v2  Mml-Mir-203-v2  Mmr-Mir-203-v2  Mmu-Mir-203-v2  Mun-Mir-203-v2  Neu-Mir-203-v2  Oan-Mir-203-v2  Ocu-Mir-203-v2  Pab-Mir-203-v2  Pbv-Mir-203-v2  Rno-Mir-203-v2  Sha-Mir-203-v2  Spt-Mir-203  Sto-Mir-203-v2  Tgu-Mir-203-v2  Xtr-Mir-203-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015170282.1: 207477-207536 [-]
Precursor
(pre-Mir +30nt flank)
AAGCGACUCCGACAGCAGCCCCCUGGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUGUAGCAUAAUUGUGAAAUGUUUAGGACCACUUGAGCCGGGGCGGCCUGGGCACCGCCGAGGAG
Get precursor sequence
Structure
        10         20         30         40        50          
AAGCGACUCCGACAGCA-   -|     GUG  -        U    G    A  GUUCUGU 
                  GCC CCCUGG   CA GUGGUUCU AACA UUCA CA       \
                  CGG GGGGCC   GU CACCAGGA UUGU AAGU GU       A
GAGGAGCCGCCACGGGUC   C^     GA-  U        U    A    -  UAAUACG 
.       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Gja-Mir-203-v2_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUUAACAGUUCAACA -22
Get sequence
Mature sequence

Gja-Mir-203-v2_3p
mirBase accessionNone
Sequence 
39- UGAAAUGUUUAGGACCACUUG -60
Get sequence