MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-203-v2

Family name MIR-203 (all species)
Seed GAAAUGU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues Oan-Mir-203-v1 
Orthologues Aca-Mir-203-v2  Ami-Mir-203-v2  Bta-Mir-203-v2  Cfa-Mir-203-v2  Cja-Mir-203-v2  Cpi-Mir-203-v2  Cpo-Mir-203-v2  Dno-Mir-203-v2  Eca-Mir-203-v2  Ete-Mir-203-v2  Gga-Mir-203-v2  Gja-Mir-203-v2  Hsa-Mir-203-v2  Lch-Mir-203  Loc-Mir-203-v2  Mdo-Mir-203-v2  Mml-Mir-203-v2  Mmr-Mir-203-v2  Mmu-Mir-203-v2  Mun-Mir-203-v2  Neu-Mir-203-v2  Ocu-Mir-203-v2  Pab-Mir-203-v2  Pbv-Mir-203-v2  Rno-Mir-203-v2  Sha-Mir-203-v2  Spt-Mir-203  Sto-Mir-203-v2  Tgu-Mir-203-v2  Xtr-Mir-203-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041728.1: 64035377-64035437 [+]
Precursor
(pre-Mir +30nt flank)
CGGGGACCCACGCGGCAGUCUCCCUGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUCUGGCCUAAUUGUGAAAUGUUUAGGACCACUUGACCCGGGCAGGCCUCGGCAGCGGCGAAGGCG
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Structure
        10          20         30        40        50          
CGGGGACCCACGCGGCA--    -|  U   GC         U    G    A  GUUCUCU 
                   GUCU CCC GGU  AGUGGUUCU AACA UUCA CA       \
                   CGGA GGG CCA  UCACCAGGA UUGU AAGU GU       G
GCGGAAGCGGCGACGGCUC    C^  C   GU         U    A    -  UAAUCCG 
 .       110       100        90        80        70
Deep sequencing
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CommentUnlike most other vertebrates this appears to be a separate DICER cut in addition to a 3' monouridylation.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Star sequence

Oan-Mir-203-v2_5p*
mirBase accessionNone
Sequence 
0- AGUGGUUCUUAACAGUUCAACA -22
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Mature sequence

Oan-Mir-203-v2_3p
mirBase accessionNone
Sequence 
39- UGAAAUGUUUAGGACCACUUGA -61
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