| MirGeneDB ID | Pab-Mir-8-P2b |
|---|---|
| Family name | MIR-8 (all species) |
| Seed | AACACUG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-8-P1a Pab-Mir-8-P1b Pab-Mir-8-P2a Pab-Mir-8-P3a |
| Orthologues | Aae-Mir-8 Aga-Mir-8 Agr-Mir-8 Asu-Mir-8 Bfl-Mir-8-P2 Bge-Mir-8 Bko-Mir-8 Bla-Mir-8-P2 Bpl-Mir-8 Bta-Mir-8-P2b Cbr-Mir-8 Cel-Mir-8 Cfa-Mir-8-P2b Cin-Mir-8-P2 Cja-Mir-8-P2b Cpo-Mir-8-P2b Csc-Mir-8 Cte-Mir-8 Dan-Mir-8 Dgr-Mir-8 Dlo-Mir-8 Dma-Mir-8 Dme-Mir-8 Dmo-Mir-8 Dno-Mir-8-P2b Dpu-Mir-8 Dre-Mir-8-P2b Dsi-Mir-8 Dya-Mir-8 Eba-Mir-8 Eca-Mir-8-P2b Egr-Mir-8 Esc-Mir-8 Ete-Mir-8-P2b Gpa-Mir-8 Gsa-Mir-8 Hme-Mir-8 Hru-Mir-8 Hsa-Mir-8-P2b Isc-Mir-8 Laf-Mir-8-P2b Lan-Mir-8 Lgi-Mir-8 Lhy-Mir-8 Llo-Mir-8 Mdo-Mir-8-P2b Mgi-Mir-8 Mml-Mir-8-P2b Mmr-Mir-8-P2b Mmu-Mir-8-P2b Mom-Mir-8 Npo-Mir-8 Oan-Mir-8-P2b Obi-Mir-8 Ocu-Mir-8-P2b Ofu-Mir-8 Ovu-Mir-8 Pau-Mir-8 Pca-Mir-8 Pdu-Mir-8 Pfl-Mir-8 Pmi-Mir-8 Pve-Mir-8 Rno-Mir-8-P2b Rph-Mir-8 Sha-Mir-8-P2b Sko-Mir-8 Sma-Mir-8 Snu-Mir-8 Spu-Mir-8 Tca-Mir-8 Tur-Mir-8 War-Mir-8 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054689.2: 7030360-7030424 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCGUAGUUCUCUGUUGGCCGGCCCUGGGUUCAUCUUCCAGUACAGUGUUGGAUGGUCUAAUUGUGAAGCUCCUAACACUGUCUGGUAAAGAUGGCCCCCGGGUGGGUUCUCUCGGCAGUGACCUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCGUAGUUCUCUGUUGG-- G U UU --| U AUGGUCUAA CC GCCC GGG CAUCUU CCAG ACAGUGUUGG U GG UGGG CCC GUAGAA GGUC UGUCACAAUC U UUCCAGUGACGGCUCUCUU G C CG AU^ - CUCGAAGUG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-8-P2b_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAUCUUCCAGUACAGUGUUGGA -22
Get sequence
|
| Mature sequence | Pab-Mir-8-P2b_3p (predicted) |
| mirBase accession | None |
| Sequence |
42- UAACACUGUCUGGUAAAGAUGGC -65
Get sequence
|
