Mir-8-P2b

MirGeneDB ID

Mml-Mir-8-P2b

Family name

MIR-8 (all species)

Seed

AACACUG

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-141

Paralogues

Mml-Mir-8-P1a Mml-Mir-8-P1b Mml-Mir-8-P2a Mml-Mir-8-P3a

Orthologues

Aae-Mir-8 Aga-Mir-8 Agr-Mir-8 Asu-Mir-8 Bfl-Mir-8-P2 Bge-Mir-8 Bko-Mir-8 Bla-Mir-8-P2 Bpl-Mir-8 Bta-Mir-8-P2b Cbr-Mir-8 Cel-Mir-8 Cfa-Mir-8-P2b Cin-Mir-8-P2 Cja-Mir-8-P2b Cpo-Mir-8-P2b Csc-Mir-8 Cte-Mir-8 Dan-Mir-8 Dgr-Mir-8 Dlo-Mir-8 Dma-Mir-8 Dme-Mir-8 Dmo-Mir-8 Dno-Mir-8-P2b Dpu-Mir-8 Dre-Mir-8-P2b Dsi-Mir-8 Dya-Mir-8 Eba-Mir-8 Eca-Mir-8-P2b Egr-Mir-8 Esc-Mir-8 Ete-Mir-8-P2b Gpa-Mir-8 Gsa-Mir-8 Hme-Mir-8 Hru-Mir-8 Hsa-Mir-8-P2b Isc-Mir-8 Laf-Mir-8-P2b Lan-Mir-8 Lgi-Mir-8 Lhy-Mir-8 Llo-Mir-8 Mdo-Mir-8-P2b Mgi-Mir-8 Mmr-Mir-8-P2b Mmu-Mir-8-P2b Mom-Mir-8 Npo-Mir-8 Oan-Mir-8-P2b Obi-Mir-8 Ocu-Mir-8-P2b Ofu-Mir-8 Ovu-Mir-8 Pab-Mir-8-P2b Pau-Mir-8 Pca-Mir-8 Pdu-Mir-8 Pfl-Mir-8 Pmi-Mir-8 Pve-Mir-8 Rno-Mir-8-P2b Rph-Mir-8 Sha-Mir-8-P2b Sko-Mir-8 Sma-Mir-8 Snu-Mir-8 Spu-Mir-8 Tca-Mir-8 Tur-Mir-8 War-Mir-8

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Nephrozoa

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014346.1: 7137478-7137542 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-8-P2b)

Mir-8-P1b CM014346.1: 7137069-7137130 [+] UCSC Ensembl
Mir-8-P2b CM014346.1: 7137478-7137542 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCGUAGUUCUCUUUUGGCCGGCCCUGGGUCCAUCUUCCAGUACAGUGUUGGAUGGUCUAAUUGUGAAGCUCCUAACACUGUCUGGUAAAGAUGGCCCCCGGGUCGGUUUUUCGGCAGUGACCUUC

Get precursor sequence

Structure

        10          20        30          40        50        60 
CCGUAGUUCUCUUUUGG--       U   U       --|   U          AUGGUCUAA 
                   CCGGCCC GGG CCAUCUU  CCAG ACAGUGUUGG         U
                   GGCUGGG CCC GGUAGAA  GGUC UGUCACAAUC         U
CUUCCAGUGACGGCUUUUU       C   C       AU^   -          CUCGAAGUG 
   120       110       100        90         80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-8-P2b_5p* (predicted)

mirBase accession

MIMAT0026561

Sequence

0- CAUCUUCCAGUACAGUGUUGGA -22

Get sequence

Proposed targets

TargetScanVert: mml-miR-141-5p

Mature sequence

Mml-Mir-8-P2b_3p

mirBase accession

MIMAT0002196

Sequence

42- UAACACUGUCUGGUAAAGAUGGC -65

Get sequence

Proposed targets

TargetScanVert: mml-miR-141-3p