MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-192-P1

Family name MIR-192 (all species)
Seed UGACCUA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-192-P1  Ami-Mir-192-P1  Bta-Mir-192-P1  Cfa-Mir-192-P1  Cli-Mir-192-P1  Cmi-Mir-192-P1  Cpi-Mir-192-P1  Cpo-Mir-192-P1  Dno-Mir-192-P1  Ebu-Mir-192-o1  Ete-Mir-192-P1  Gga-Mir-192-P1  Gja-Mir-192-P1  Hsa-Mir-192-P1  Lch-Mir-192-P1  Mdo-Mir-192-P1  Mml-Mir-192-P1  Mmu-Mir-192-P1  Mun-Mir-192-P1  Oan-Mir-192-P1  Oan-Mir-192-P1-as  Ocu-Mir-192-P1  Pbv-Mir-192-P1  Pma-Mir-192-o1  Rno-Mir-192-P1  Spt-Mir-192-P1  Tgu-Mir-192-P1  Xla-Mir-192-P1a  Xla-Mir-192-P1b  Xtr-Mir-192-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01002633.1: 139138-139199 [-]
Precursor
(pre-Mir +30nt flank)
AUUUUAAUUAAGGUAAAGGUGUACAGGACAAUGACCUAUGAAUUGACAGCCAGUGCAAUUACAGAUUUGCCUGUCAGUUCCAUAGGCCACUAUUUUGUUCACCACAAUAUUGCAAAAAGUUC
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Structure
        10          20        30         40        50          
AUUUUAAUUAAGGUAAA--    U      CAA  A     -|         C  GUGCAAU 
                   GGUG ACAGGA   UG CCUAU GAAUUGACAG CA       \
                   CCAC UGUUUU   AC GGAUA CUUGACUGUC GU       U
CUUGAAAAACGUUAUAACA    U      AUC  C     C^         C  UUAGACA 
120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Sto-Mir-192-P1_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAAUUGACAGCCA -22
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Star sequence

Sto-Mir-192-P1_3p*
mirBase accessionNone
Sequence 
39- CCUGUCAGUUCCAUAGGCCACUA -62
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