MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-11619-P5

Family name MIR-11619 (all species)
Seed GAGAGUU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-11619f
Paralogues Tca-Mir-11619-P1  Tca-Mir-11619-P2  Tca-Mir-11619-P3  Tca-Mir-11619-P4 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 LG2: 1139937-1139997 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-11619-P5)		 Mir-11619-P5 LG2: 1139937-1139997 [+] Ensembl
Mir-11618-P6 LG2: 1141029-1141087 [+] Ensembl
Mir-3851-P5a LG2: 1141446-1141505 [+] Ensembl
Mir-11617-P6b LG2: 1142386-1142443 [+] Ensembl
Mir-11618-P4 LG2: 1143177-1143235 [+] Ensembl
Mir-11619-P4 LG2: 1144051-1144110 [+] Ensembl
Mir-11618-P5 LG2: 1144897-1144955 [+] Ensembl
Mir-3851-P4a LG2: 1145318-1145377 [+] Ensembl
Mir-11621-P1 LG2: 1146138-1146196 [+] Ensembl
Mir-11617-P6a LG2: 1146293-1146350 [+] Ensembl
Mir-11618-P1 LG2: 1147094-1147152 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAUAUUAACCAAAAUUAUCGAAUGAGAGAUGAGAGUUUGUGAUAAUCUUCAUUUUAGAAUUUAACAAAUGAGGAGUCACAGACUUGAUCUUUCGCUCGAUUGCUCGACACCAUUUUGAUC
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Structure
        10           20        30        40        50        60 
UAAUAUUAACCAAAAUU---|    A        GA           AA         UAGAA 
                    AUCGA UGAGAGAU  GAGUUUGUGAU  UCUUCAUUU     \
                    UAGCU GCUUUCUA  UUCAGACACUG  AGGAGUAAA     U
CUAGUUUUACCACAGCUCGU^    C        G-           --         CAAUU 
 .       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-11619-P5_5p
mirBase accessionMIMAT0045508
Sequence 
0- UGAGAGUUUGUGAUAAUCUUCAUUU -25
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Co-mature sequence

Tca-Mir-11619-P5_3p
mirBase accessionMIMAT0045509
Sequence 
39- UGAGGAGUCACAGACUUGAUCU -61
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